| | | | | | . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 |
| # |
Score |
Template |
Links and tools | %id | First |
VCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR | Last |
| 1 | -115.000 | d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} |
ali model 3D-neighbors follow.. |
100 | 4 | VCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR |
225 |
| 2 | -99.100 | d2yc3a1 c.68.1.13 (A:76-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} |
ali model 3D-neighbors follow.. |
31 | 4 | VSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESDVDLSFAIPGKERQDSVYSGLQEIDNSELVCIHDSARPLVNTEDVEKVLKDGSAV-GAAVLGVPAKATIKEVNS-DSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE |
225 |
| 3 | -98.700 | d2xwla1 c.68.1.0 (A:2-219) automated matches {Mycobacterium smegmatis [TaxId: 1772]} |
ali model 3D-neighbors follow.. |
36 | 2 | TVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-EDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDA-NGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLA. |
218 |
| 4 | -98.500 | d4myba_ c.68.1.0 (A:) automated matches {Francisella tularensis [TaxId: 263]} |
ali model 3D-neighbors follow.. |
35 | 3 | KYVIIPAAGIGTRMQLDIPKQYYKLNGKTILDNTLVKFIDNPLFDKIFVAIAASDNFWNNSLYYNHDKIVVCNGGETRFNSVYNALNVIDNDDWVFVHDAARPCVSIDSIIDLYEQTKSSHQAGILAVRAYETVKQVT--KNIVVKTLARDNIWLAQTPQLSRLGQLEKAFDFCYSNNLKVTDEASALEMFGINPIVVECSKKNIKITTKDDLEYANWQL.. |
227 |
| 5 | -96.700 | d5ddta_ c.68.1.0 (A:) automated matches {Bacillus subtilis [TaxId: 224308]} |
ali model 3D-neighbors follow.. |
34 | 3 | YDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDYTSIELVAGGDERQHSVYKGLKAVKQEKIVLVHDGARPFIKHEQIDELIAEAEQT-GAAILAVPVKDTIKRVQ--DLQVSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMGGSVRVVEGSYTNIKLTTPDDLTSAEAIMES |
225 |
| 6 | -93.300 | d4kt7a1 c.68.1.0 (A:1-230) automated matches {Anaerococcus prevotii [TaxId: 525919]} |
ali model 3D-neighbors follow.. |
26 | 7 | ISAIITAAGSGLRMRSKINKPYIEVGGRKVLEITLDTVSRVKEIDEIILVIRKDDEDIIKDILEKYGNIRYVYGSTTRELSTFEGLKALDQSELVLTHDGVRPFASEELFLKTINALRKN-KAVITATKSKDTVKIIDD-DMYVDFTPNRDYVYNIQTPQAFDKKLIYAMYEKYLASEFKVTDDSQLFEFFDEKVKVVHGEYSNIKITTQEDIIFANAYLQR |
230 |
| 7 | -91.000 | d1vpaa1 c.68.1.13 (A:1-219) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} |
ali model 3D-neighbors follow.. |
29 | 3 | .VAILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVFHEKVLGIVEGGDTRSQSVRSALEFLESPSYVLVHDSARPFLRKKHVSEVLRRARET-GAATLALKNSDALVRVEND---RIEYIPRKGVYRILTPQAFSYEILKKAHENGGE----WADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIARE |
217 |
| 8 | -91.000 | d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} |
ali model 3D-neighbors follow.. |
25 | 2 | MSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSSNITYMK-----KFTKNYEFIEGGDTRAESLKKALELI-DSEFVMVSDVARVLVSKNLFDRLIENLDKA-DCITPALKVADTTLFDN-------EALQREKIKLIQTPQISKTKLLKKALD----QNLEFTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLDLPTP. |
204 |
| 9 | -87.800 | d2vsha_ c.68.1.0 (A:) automated matches {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]} |
ali model 3D-neighbors follow.. |
23 | 3 | IYAGILAGGTGTRMGSNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYERIIITKGGADRNTSIKNIIEAIDPEDIVVTHDSVRPFITLRMIQDNIQLAQN-HDAVDTVVEAVDTIVESTNG-QFITDIPNRAHLYQGQTPQTFRCKDFMDLYGSLSDEEEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMIE. |
234 |
| 10 | -24.700 | d1hm9a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]} |
ali model 3D-neighbors follow.. |
17 | 2 | NFAIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAEL--VEEVLAGQTEFVTQSEQLGTGHAVMMTEPILEGLS-TLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDN-RIVRNDNAEVLRIVEQKDATDFEKQYVFDNERLFEALKNINTNNYYITDVIGIFRETGEKVGAYKDFDESLGVNDRVALATAESVMRR |
240 |
| 11 | -24.600 | d1h7ea_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KpsU [TaxId: 562]} |
ali model 3D-neighbors follow.. |
17 | 3 | AVIVIPARYGSSRLPG---KPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQAFGGKAIMT--ESGTDRLVEVMHKV----EADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVTLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPYAYRRDVLQNQLPESMPEQAESLEQLRLMNA-GINIRTFEVAATGPGVDTPACLEKVRALMAQ |
239 |
| 12 | -21.800 | d2y6pa_ c.68.1.0 (A:) automated matches {Aquifex aeolicus [TaxId: 63363]} |
ali model 3D-neighbors follow.. |
15 | 2 | RAVIIPARLGSTRLKE---KPLKNLLGKPLIRWVVEGLVKT--GERVILATDSERVKEVVEDLCEVFLTP--PSGSDRVLYVVRDL----DVDLIINYQGDEPFVYEEDIKLIFRELEKGE--RVVTLARKDKEAYERPEDVKVVLDREGYALYFSRSPYGFRKETLMEAMPPSKLEQIEGLEQLRLLEN-GIKIKVLITENYYHGVDTEEDLKIVEEKLK. |
231 |
| 13 | -21.300 | d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]} |
ali model 3D-neighbors follow.. |
11 | 4 | LAALVLARGGSKGIPL---KNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTDHDEIENVAKQFGAQRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRRHEIQKGVREVTEPLNLNPAKRPRRQDWDGELENGSFYFAKRHLIEMGYLQGGKMAYYEM---------RAEHSVDIDVDIDWPIAEQRVLR |
222 |
| 14 | -20.800 | d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} |
ali model 3D-neighbors follow.. |
14 | 3 | PSAIVLAGGKEAWAEGVGSKALVPYRGRPMVEWVLEALYAAG--LSPVYVGENPGLV--------PAPALTLPDRGGLLENLEQALEHVEGRVLVATGD---PHLTEEAVRFVLDKAPEAA--LVYPIVPKEAVEARFPRTKLREGTFTGGNLLLLDKSLFRKALPLARRVVALRKRPLALAREARAQRILGVEARALVTPYPEVDVDREEDLV........ |
231 |
| 15 | -19.500 | d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} |
ali model 3D-neighbors follow.. |
18 | 4 | ITGVVLAGGKARRMGGV-DKGLLELNGKPLWQHVADALM--TQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGP--LAGMLSVMQQE-AGEWFLFCPCDTPYIPPDLAARLNHQRKDAPV----------VWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMVFMRLAGGHAVDFSDHKDAF----------------VNVNTPEELARWQ..... |
188 |
| 16 | -19.100 | d1ezia_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]} |
ali model 3D-neighbors follow.. |
13 | 5 | NIAVILARQNSKGLPL---KNLRKMNGISLLGHTINAAISSKCFDRIIVSTDGGLIAEEAKNFGVERPAELASDTASSISGVIHALETIGSNGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMETLLQINNGEYAPMRHLSDLEQPRQQLPQAFRPNIYINDTASLIANNCFFIAPTKLY---------IMSHQDSIDIDTELDLQQAENILN. |
224 |
| 17 | -16.000 | d2e8ba_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Aquifex aeolicus [TaxId: 224324]} |
ali model 3D-neighbors follow.. |
15 | 12 | NTCYVLAGGKSKRFGED--KLLYEIKGKKVIERVYETAK--SVFKEVYIVAKDRE----KFSFLNAPVVLDEFEESASIIGLYTALKHA-KEENVFVLSGDLPLMKKETVLYVLENFKEHTLVGVYSKKLLEKIEEIKKGDYRIWALLKDVGYNEVEIPE.............................................................. |
173 |
| 18 | -15.900 | d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} |
ali model 3D-neighbors follow.. |
15 | 2 | RKGIILAGGSGTRLHLAISKQLLPVYDKPMIYYPLSTLMLAG-IREILIISTPQDTPRFQQLLGDGSNWGLDLQYAVQPSAFLIGESFIGNDLSALVLGD---LYYGHDFHELLGSASQRQTGASVFAYHVLDPERYGDQGGKAISLEEKPL--YFYDQQVVD---IARDLKPSPRGELEITD-RAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIAT |
240 |
| 19 | -15.500 | d1jyka1 c.68.1.13 (A:7-231) CTP:phosphocholine cytidylytransferase LicC {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]} |
ali model 3D-neighbors follow.. |
11 | 2 | ..AIILAAGLGTRLRENTPKALVQVNQKPLIEYQIEFLKEKG-INDIIIIVGYLKEQF--DYLKEKYGVRLVFNDKYADYNNFYSLYLVKENSYVIDADNY---------NMFRNDLTRSTYFSVYREDCTNEWFLVYGDDYKVQDIIVDSKFWDAPTAEKIV-SFIDKAYVSGEFVDLYWDN-KDNIKELDVYVEELEGNS--YEIDSVQDYRKLEEILK. |
225 |
| 20 | -12.400 | d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} |
ali model 3D-neighbors follow.. |
17 | 3 | TYALVMAGGRGERLREDRPKPFLPLEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADGIRLLLEPLGRDTAGAVLLGVAEALKGAERLLVLPADHYVGDDEAYREALATMLEAEEGFVVALGLRPTRPETKPSYAEALEYIRKGYVWNG----AFAPATMAELFRRHLPSHHEALERLLAGASLEEVYAGLPKISIDYGVMEKAE.......... |
242 |
| 21 | -12.300 | d1tzfa1 c.68.1.13 (A:4-259) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} |
ali model 3D-neighbors follow.. |
15 | 2 | ..AVILAGGLGTRLSIVKPKPMVEIGGKPILWHIMKMYSVHG-IKDFIICCGAENRMEVHHKRVEPWNVTLVDTGDSTGGRLKRVAEYVKDDEAFLFTYG--DGVADLDIKATIDFHKAHGKATLTATFPPGRFGALDIQAGQVRSFQEKPKGDGAMINGGF-FVLNPSVIDLIDNDATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEK |
247 |
| 22 | -9.150 | d2yqca_ c.68.1.0 (A:) automated matches {Yeast (Candida albicans) [TaxId: 5476]} |
ali model 3D-neighbors follow.. |
12 | 102 | VAVLLMAGGQGTRLGSSAPKGCFNIEQKSLFQIQAEKILKIEQLAQWYIMTSGPTRNATESFFIENNYF------------------GLNSHQVIFFNQGTLPCFNLQ--------------GNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANES................ |
290 |
