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Query: PF06933.11; O44418_CHIPA/1-756; Special lobe-specific silk protein SSP160, from PfamA32U

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNIKVILVCALVAIFFAQVAEGGPIANFVGFVISLLFSLFEVMVSVVFDVKSFTSLSTPTCNSTVPSFATRVGGGRFSGIITASFNMIAMISANVQAIQSGSGSTSGSSSSSTTSTSNSTTTTSNSTTTTTNSTTSSNSTSSGLTSSASVVSLIDTIAWVYQDSSVGIAYLMVSILALFYGQSVSAPPYPDLGIPALPANCSGPGVPQSVQIRAAIAYVNITIYFINMTGQQFEDLQGPVATDCGCPNTTSVAPLVLEWEAILAALQALANSTASANSTTSSNSTTTTTTNSTSTTTTNSTTTTNSTSSSNSSTIAGCIDISANFTIALQSLQALLLQESTCAPALAANAKKSGVRDMSPCKPGKTASGCAKSGEKKVKRKARLEKMRAKCRRAVGNRMKGSMKKRVRSRAKKFGEAAKSGVRRYRKNIKYVYIPPVMASLNAYAALMASLSESISSQSDSALNSTDQACNSTGSNTDAAVIAATNNVTDMFANFTAMVLNNTVAYPNCTQFADMALLMISQINDQIISCGSQSDDAESSIYFNVTINIVAMAQEYNNFASMSDKCTRSFANSWLWMYIKWVFYRMGMTSGIPNFLACQTKAESSLTALLASFNATINATIAAASANSSSVQSSEASCIESSLSDASAILAMYENAYQNCVAPGSVPDAANTTTTSTTTTTTTTTTAAPTTTTTKAANAPFTYPLCNLQMTAACVAGLPTCTYPFISSAGCCPSGKTLNTGLGGRGCCKLast
1 -6.990d1wqjb1 g.3.9.1 (B:3-82) Insulin-like growth factor-binding protein 4 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  23  7.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CSEEKLARCRPPVGCEELVREPGCGCCA---ALGLG---MPCC. 51
2 -5.960d1g4ia_ a.133.1.2 (A:) Phospholipase A2 {Cow (Bos taurus), pancreas [TaxId: 9913]}  ali model 3D-neighbors follow..  43  23......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NNYGCC--------GLGGSGCCQ 46
3 -5.830d1jnrb_ d.58.1.5 (B:) Adenylylsulfate reductase B subunit {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  31  11.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCPNDLMTLDKEKMKECC. 52
4 -5.770d1gtea5 d.58.1.5 (A:845-1017) Dihydropyrimidine dehydrogenase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}  ali model 3D-neighbors follow..  25  110........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................INCCNDSGYQAIQFDPEGCC. 148
5 -5.770d1oeda_ f.36.1.1 (A:) Acetylcholine receptor protein, alpha chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}  ali model 3D-neighbors follow..  19  6VNIPCLLFSFLTGLVFYLPTDSGE----MTLSISVLLSLTVFLL-VIVELIPSTSSAVPLIGKYMLFTMIFVISSIIITVVVINT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 88
6 -5.730d2z7fi_ g.3.14.0 (I:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  26  2......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................RKPGKCPDGQC----KRDLKCCM 37
7 -5.500d2pspa2 g.16.1.1 (A:54-106) Pancreatic spasmolytic polypeptide {Pig (Sus scrofa) [TaxId: 9823]}  ali model 3D-neighbors follow..  20  3..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EECVMQVSARKNCGYPGISPED---ARNCC. 31
8 -5.380d2pspa1 g.16.1.1 (A:1-53) Pancreatic spasmolytic polypeptide {Pig (Sus scrofa) [TaxId: 9823]}  ali model 3D-neighbors follow..  21  3..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................PAACRCSRQDPKNRVNCGFPGITSDQ---TSGCC. 35
9 -5.340d2g58a_ a.133.1.2 (A:) automated matches {Daboia russellii [TaxId: 97228]}  ali model 3D-neighbors follow..  47  22......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SSYGCC--------GWGGKGCCF 45
10 -5.310d1oedc_ f.36.1.1 (C:) Acetylcholine receptor protein, delta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}  ali model 3D-neighbors follow..  20  6INTPCVLISFLASLAFYLPAESGE----MSTAISVLLAQAVFLL-LTSQRLPETALAVPLIGKYLMFIMSLVTGVIVNCGIV........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 85

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 1 8 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.