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Query: PF11944.8; Y2971_PHOPR/1-125; Protein of unknown function (DUF3461 topsan), from PfamA32U

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MYPHLTSIGIEQPEAIERYSLRQEAANDILKVYFAKNKGELFAKSVKFKFPRQRKSVLVNSGSREYKEITEINRTLTHIIDELDIITKRKHTEVDIKKKILGDLRHLERVVSHKISEIEADLEKLLast
1 -7.060d1lkia_ a.26.1.1 (A:) Leukemia inhibitory factor (LIF) {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  14  23...................AQLNGSANALFISYYTAQGEPFPNNVEKLCAPNMTDFPSFHGNGTEKTKLVELYRMVAYLSASLTNITRDQKVLNPTAVSLQVKLNATIDVMRGLLSNVLCRLCNK 128
2 -6.190d1yg2a_ a.4.5.61 (A:) Hypothetical protein AphA {Vibrio cholerae [TaxId: 666]}  ali model 3D-neighbors follow..  7.......LTVLSTRDATGYDITKEFSAS-IGYFWKASHQQVYRELNKMGEQGLVTCVLEPQEGKPDRKVYSITQ---AGRSALGEWFDQPTAHPTVRDEFSAKLEPYRLQLAELVEESRKLVAHY 128
3 -5.850d1cnt1_ a.26.1.1 (1:) Ciliary neurotrophic factor (CNTF) {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  5..........DLCSRSIWLARKIRSDLTALTESYVKHQGLNKNINLDSADGMPVASTDQWSELTEAERLQENLQAYRTFHVLLARLLEDQQVHTPTEGDFHQAIHTLLLQVAAFAYQIEELMILL 120
4 -5.640d5x14a1 a.4.5.0 (A:1-182) automated matches {Bacillus subtilis [TaxId: 655816]}  ali model 3D-neighbors follow..  9.......LGLLRKGELSGYDITSYFKEE-LGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQELHD---LIRHQPIPETVKDEFMLKAQEASDLFTDQLLKRKAKLSDL 131
5 -5.630d1mo9a3 d.87.1.1 (A:384-523) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}  ali model 3D-neighbors follow..  10  12..YEVSFLGMGEEE-----ARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDVGYGAKDAFQYLNVLIKQGLTVDELGDMDELFLNPTHFIQLSRLRAGSKNLVSL 140
6 -5.390d2qsba1 a.29.14.1 (A:2-86) Uncharacterized protein Ta0600 {Thermoplasma acidophilum [TaxId: 2303]}  ali model 3D-neighbors follow..  12  23................................................TVPKNVRKVAQDSKAKLSQENESLDLRCATVLSMLDEMANDPNVPAHGRTDLYTIISKLEAL............... 84
7 -5.370d1st6a3 a.24.9.1 (A:253-371) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}  ali model 3D-neighbors follow..  12  45...................................................QAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVEN. 117
8 -5.320d1evsa_ a.26.1.1 (A:) Oncostatin M {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  15  11............LGQLQKQTDLMQDTSRLLDPYIRI-QGLDVPKLREHERPGAFPSEETLRGLGRRGFLQTLNATLGCVLHRLADLEQRLPKAQDLNIEDLEKLQMARPNILGLRNNIYCMAQLL 129
9 -5.290d4p1ma_ d.244.1.0 (A:) automated matches {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  13  51..........................................................................VFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITEKT 101
10 -5.210d1efdn_ c.92.2.1 (N:) Periplasmic ferric siderophore binding protein FhuD {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  23....IVPYGVADTINYRLWVSEPPLPDSVIDVGLRTE-----PNLELLTEMKPSFMVWSAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLADFIRSMKPRFVK. 140

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 6 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.