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Query: PF15029.6; H0VXD9_CAVPO/9-242; Transmembrane protein 174, from PfamA32U

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst DDFSLNVFSLTPYTPSTADIQVSDDDKAGATLLFSGIFLGLVGITFTVMGWIKYQSVSHFEWTQLLGPILLSVGVTFILIAVCKFKMLSCQLCKESEERVPDSEQTSGGQSFVFTGINQPITFHGATVVQYIPPPYGSQEPMAMNTAYLQSMVNPCGLLPSGGAAGAMPSPPQYCTICPQDNAAFVESEDYSSITDGRNSRSSLGADRLGEMQLEEEDYARFSSPPPYEEIYALLast
1 -7.510d4p79a1 f.63.1.1 (A:2-186) Claudin-15 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  10  61............CWDFPSMLALSGYVQGCRALMITAILLGFLGLFLGMVGLRATNVGNMDLSKKAIAGTLHILAGACGMVAIS---WYAVNITTDFFNPLYAGTKYELGPALYLGWSASLLSILGGICVFS....................................................................................................... 180
2 -7.500d3x29a_ f.63.1.1 (A:) Claudin-19 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  13  61............CKLYDSLLALDGHIQSARALMVVAVLLGFVAMVLSVVGMKATRVGDS---PTAKSRVAISGGALFLLAGLCTLTAVSWYATLVTQESTPVNARYEFGPALFVGWASAGLAMLGGSFLAA....................................................................................................... 181
3 -7.050d3jbre_ f.63.1.1 (E:) L-type calcium channel Gamma-1 subunit {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}  ali model 3D-neighbors follow..  10  81..SYFRHFNPGESSEIFEFTTQKEYSISAAAISVFSLGFLIMGTICALMAFRKKRDY-----------LLRPASMFYVFAGLCLFVSLEVMR-RMIDSEDTVWIEYYYSWSFACACAAFVLLFLGGISLLLF...................................................................................................... 202
4 -6.820d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  9................................................IHWRTLEDGKKEAAAS---PLMVIIHKSW------------CGACKALKPKFAESTEISESHNFVMVNLEEPKDEDFSPDGGYIP..................................................................................................... 84
5 -6.800d5o9ze2 d.58.10.3 (E:540-675) Spliceosomal U4/U6 small nuclear ribonucleoprotein Prp3 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  1...................................GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDLVWEGTAKDRSFGEMKFKQC....................................................................................................... 112
6 -6.360d2k2ca1 g.89.1.1 (A:1-82) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  15  1...............................MAATAREDGATGEERGQRGCEHYDRGCL------------------LKAPCCD-KLYTCRLCHDNNEDHQLDRFKVKEVQCINCEKIQHA................................................................................................................. 71
7 -6.250d2omda_ d.41.5.0 (A:) automated matches {Aquifex aeolicus [TaxId: 224324]}  ali model 3D-neighbors follow..  11  11.......LGHEWFGAERILSEYQVPEDCGAQVLFLGIPRN--GGNIEALEYEAYPEMAIKEMEKIRQETIVKIGEPSFLVLA----------------VGGHREETFKACRYAVDETKKRVPI............................................................................................................... 128
8 -6.190d1fm0e_ d.41.5.1 (E:) Molybdopterin synthase subunit MoaE {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  11  7.......VGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRN--GDSVNALTLEHYPGMTEKALAEIVDEARLWPGDEIVFVGV----------------TSAHRSSAFEAGQFIMDYLKTRAPF............................................................................................................... 123
9 -6.050d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  16  94................QLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGR------LSRFPRFVNVTVTPEDQCRPNNV----CTGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGRGPDFFTRVAL............................................................................................. 208
10 -5.820d4aana1 a.3.1.0 (A:24-188) automated matches {Geobacter sulfurreducens [TaxId: 243231]}  ali model 3D-neighbors follow..  23  32.................................................................LGRML------FFDPRLSASHLISCNTCHNVGLGGTDILETSIGHGWQKGPRNSPTVLNAV............................................................................................................ 86
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.