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Query: PF15961.5; ZN839_HUMAN/7-805; Domain of unknown function (DUF4764 topsan), from PfamA32U

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst IQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQPPAQGFVQRPLPALQVVPAKRVPAPKAPDEQGSMLTPLSASDPLAVTSLSSSSAHPFISNLHTRHTEKLKKSLKVKTRSGRVSRPPKYKAKDYKFIKTEDLADGHLSDSDDYSELCVEEDEDQRERHALFDLSSCSLRPKSFKCQTCEKSYIGKGGLARHFKLNPGHGQLDPEMVLSEKASGSTLRGCTEERTLSLTSLGLSMPADPCEGGARSCLVTESARGGLQNGQSVDVEETLPSEPENGALLRSERYQGPRRRACSETLAESRTAVLQQRRAAQLPGGPAAAGEQRASPSKARLKEFLQQCDREDLVELALPQLAQVVTVYEFLLMKVEKDHLAKPFFPAIYKEFEELHKMVKKMCQDYLSSSGLCSQETLEINNDKVAESLGITEFLRKKEIHPDNLGPKHLSRDMDGEQLEGASSEKREREAAEEGLASVKRPRREALSNDTTESLAANSRGREKPRPLHALAAGFSPPVNVTVSPRSEESHTTTVSGGNGSVFQAGPQLQALANLEARRGSIGAALSSRDVSGLPVYAQSGEPRRLTQAQVAAFPGENALEHSSDQDTWDSLRSPGFCSPLSSGGGAESLPPGGPGHAEAGHLGKVCDFHLNHQQPSPTSVLPTEVAAPPLEKILSVDSVAVDCAYRTVPKPGPQPGPHGSLLTEGCLRSLSGDLNRFPCGMEVHSGQRELESVVAVGEAMAFEISNGSHELLSQGQKQIFIQTSDGLILSPPGTIVSQEEDIVTVTDAEGRLast
1 -8.690d2wbsa_ g.37.1.0 (A:) automated matches {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  20  13...............................................................................................................KTYTKSSHLKAHLRTHTGE--KP-DWDGCGWKFARSDELTRHYRKHTGH----------------------------RPFQCQKCDRAFSRSDHLALHMKRH.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 86
2 -7.950d1x3ca1 g.37.1.1 (A:8-67) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  1..........................................................................................................................................................................RKKPVSQSLEFPTRYSPYRPYRCQGCFAAFTIQQNLILHYQA---HKSDLP.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 51
3 -7.840d2m9aa1 g.37.1.0 (A:12-98) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  1....................................................................................................................................RD-EYCARAFKSSHNLAVHRMIHTGEKPLQCEICGFTCRQKASLNWHMKKHDADSFYQFSCNICGKKFEKKDSVVAHKAKSHPE....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 86
4 -7.300d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  21  4............................................................................................................................................................................................KPYECNICAKRFMWRDSFHRHVTSCTKS....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 31
5 -7.060d1vq831 g.41.8.3 (3:1-92) Ribosomal protein L44e {Haloarcula marismortui [TaxId: 2238]}  ali model 3D-neighbors follow..  1.....................................................................................................................MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDL-----KYRCGECGKAHLREGWRAGRLEFQE......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 92
6 -6.920d2rv6a1 g.37.1.0 (A:8-92) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  1...........................................................................................................................................KIFKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCLSKGHLKVHIERVHK........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 82
7 -6.810d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  31  6...........................................................................................................................................................................................EKPYACSHCDKTFRQKQLLDMHFKRYHDP....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 34
8 -6.730d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  20  10.........................................................................................................................................................................KSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 53
9 -6.590d1srka1 g.37.1.1 (A:3-35) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  27  3...........................................................................................................................................................................................KRPFVCRICLSAFTTKANCARHLKVHTDT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 31
10 -6.580d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  25  2............................................................................................................................................................................................KPYKCKTCDYAAADSSSLNKHLRIHSD........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 28

FFAS is supported by the NIH grant R01-GM087218-01
1 4 1 5 6 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Sequence clustering strategies improve remote homology recognitions while reducing search times. Protein Eng. 2002 Aug;15(8):643-9.