FFAS03 results for PF00198

Query: PF00198.23; A4ICH2_LEIIN/226-463; 2-oxoacid dehydrogenases acyltransferase (catalytic domain), from PfamA32U

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 .`
#	Score	Template	Links and tools	%id	First	`NPNFIDIPVTTMRSVIAKRLHQSKNLEIPHYYLFDDCRVDNMLALIKQLNAKGNGEYKITVNDYIVKAVARANILVPEVNSSWQGDFIRQYATVDVSVAVATPTGLITPIIRNAQAKGLVEISKETKALAKKARDGTLQPSEFQGGTCSVSNLGATGIPGFTAIINPPQAMILAVGSAKPRAEIVKSEETGEFEMTGRVENVVNFSASFDHRIVDGALGAKWFQHFHDAMENPLSLLL`	Last
1	-91.500	`[C] KOG0557 Dihydrolipoamide acetyltransferase`	`ali follow..`	44	275	`ALDYVDIPHTQIRKVTASRLAFSKQ-TIPHYYLTVDTCVDKMMGLRSQLNSFQEAGKRISVNDLVIKAAALALRKVPQCNSSWTDEYIRQFKNVNINVAVQTENGLYVPVVKDADKKGLSTIGEEVRFLAQKAKENSLKPEDYEGGTFTVSNLGPFGIKQFCAVINPPQAAILAIGSAEKRVVPGTGP------DQYNVASYMSVTLSCDHRVIDGAIGAEWLKAFKGYIETPESMLL`	508
2	-89.100	`[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes`	`ali follow..`	27	185	`PRPEERVPMTRIRARIAERLKEVQN-TAALLTTFNEVNMQPTMELRKKYQDQFKHGVKLGFMSLFVRAATEALKAFPMVNASVDGKDVIYHGYYDIGIAVASERGLVVPILRDTDNMSLADIEKQIAEFATRARAGKLTMEDMSGGTFSITNGGTFGSMMSTPIINAPQSAILGMHNIIERPIAQNGQVV--------IAPMMYLAVSYDHRLIDGKEAVQFLVMIKNLLEDPARMLL`	415
3	-86.600	`[C] KOG0559 Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit)`	`ali follow..`	30	231	`ARDEVRVKANRMRMRIAQRLKDAQN-TYAMLTTFNEIDMSSLIEMRKTYQKDFKHGVKLGMMSPFVRAAAYALQESPVVNAVLDENEIVYRHFVDISVAVATPKGLVVPVLRNVESMNYAQIELELANLGVKARDGKLAVEDMEGGTFTISNGGVFGSMFGTPIINPPQSAILGMHGPEIRPI-------------------MQIALTYDHRLIDGREAVTFLKKIKTAVEDPRIMFM`	450
4	-45.000	`[V] COG4845 Chloramphenicol O-acetyltransferase`	`ali follow..`	12	2	`GNSYQIIDFETKRKEYCQIY---RSAVQPQYCVSFELDVMNFKRYVKE--------NNLSFTMAFIFAVTKCANEIEEFRYRFLDGEVVLYESVDITFTYLDKETELFKVVNVPMQDTIEKFVQLAIVTAENQKEHFTGPVE--NDVYQFSALPWITFTHISHTDFGNREKAQPIFDWGKYHGRDG-------------KLVMPFAVQVHHAFVDGIHIGKLADKLQRYLDE......`	208
5	-6.150	`[R] COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain`	`ali follow..`	7	209	`...............................IIWTKLPKEVFDGIVHYAKEN-----DATVNDVFFAAMVRIVQQTTHQNELSIDCPVDLRKYLPGKASQGI---ITCQINANDDLTSFESTLQAVKNSLNPQKNSKASEKMYSIPKTSFTNIGII------------DEEKLIFEGSTLTDCFICGSLKYAPFFQVAATTFLTLSTNLHGTTRDHDWQKHFLDQLAREFTL......`	421
6	-6.070	`[H] COG4062 Tetrahydromethanopterin S-methyltransferase, subunit B`	`ali follow..`	15	9	`..............................................................................................EVHLVMDPDTAVVAEEREDSILYSMDPVFERMDKLDGIAEDNSLSPSSWPGRENTSYMAGIYGNAFYGIVVGLAFSGLLALIIFIQRLI.......................................................`	104
7	-5.820	`[O] KOG0020 Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family`	`ali follow..`	9	78	`...................................QTEVNRMMKL---IINSLYRNKEIFLRELISNAS--AIDKIRLLALS-NSKELETNPELHIRIKADKENKALH-IMDSGIGMTHQDLINNLGTIAKSGTADKMQDPSKSEGLDMNDMIGQFGVGFYSAFLVADRVVVTTKHNDDKQYIWEFSITEDPRGDTLKRGSVISLYLKEEAQFLEEDTVRELIRKYSQFINFPIRM..`	281
8	-5.090	`[O] COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone`	`ali follow..`	11	13	`...............................................................................................LGIALLREDTVIAEYITYLKKNHSVRAMPAVHSLLNDC---DMAPQDLSKGSYTGVRIGVTLAKTLAWSLDIPISAVSSLETLAANGRHFDGLISP---------------------IFDARRGQVYTGLYQ...........`	127
9	-4.980	`[UT] KOG0662 Cyclin-dependent kinase CDK5`	`ali follow..`	5	5	`.................DKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREI-----CLLKELKHKNIVRLIDVLHSDKKLTLVFEHCDQDKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLINKNGEFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAELADAGRPLFPGSDVLDQLMKIFRVLGTP.....`	222
10	-4.960	`[R] COG5302 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid`	`ali follow..`	11	9	`.............................................................................SVTVTVDRELVNRARDAGLNMSATLTVALNAELKKHAATRWREENAEAIAALNQLADETGCFSDEYR..............................................................................................`	75

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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