FFAS03 results for PF01810

Query: PF01810.18; RHTC_ECOLI/13-206; LysE type translocator, from PfamA32U

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190`
#	Score	Template	Links and tools	%id	First	`IVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR`	Last
1	-76.600	`[E] COG1280 Putative threonine efflux protein`	`ali follow..`	20	14	`FFVSITPGMNMTLALTLGMSVGYRRTLWMMVGELLGVALVAVSAVVGIAAVMLRYPDIFTLFKIVGASYLVYLGVQMWRSR-GKLAINIEQENTYQGSDWGLLVQGFVTAIANPKGWAFMVSLLPPFIDQSLSLAPQLVLVAIILLSEFISMSLYATGGKGLKRLLSQAHHVRLLNRIAGSLMAGVGIWLYFS.`	206
2	-61.300	`[R] COG1279 Lysine efflux permease`	`ali follow..`	17	13	`AAMILPLGPQNAFVMNQGI--RRQYHIMIALLCAISDLVLICAGIFGGSALLMQSPWLLALVTWGGVVFLLWYGFGAFKTAMSS-NIELASAEVLKQGRWKIIATMLAVTWLNPHVYLDTFVVLGSLGGQLDVE-PKRWFALGTISASFLWFFGLAILAAWLAPRLRTAKSQRIINLVVGCVMWFIALQLARD.`	201
3	-13.900	`[U] COG2095 Multiple antibiotic transporter`	`ali follow..`	16	16	`LVAAVNPGIMPVFVSLTGHMTLEEKNKTAATANIAVAIILIIALLAG-QMLLDLFSISLDSFRVAGGLLLLSIAFSMMSGKLGEDKQNKQEKSEYISREQIAVVPLAMPLMAGP-------AISSTIVYGSRYPNMLDTLGIILTVVAFSFCSWLLFRSAPYIVRLLGQTGINVITRIMGLILGALGIEFIAN.`	202
4	-11.100	`[S] KOG2881 Predicted membrane protein`	`ali follow..`	9	75	`VIVVSELGDKTWFIA--VIMSMRHSRLTVFSGAMGALALMTVLSAC-LGWITQVIP---AVTYYLSTALFALFGLKMLHEGWTMSPNEGQEGYEEAQAEVAK-FLFTSRIFIEAFSLTFVAEW-SQLTTIILGARENIAGVIGGGILGHALCTGIAVIGGKIVAQR-----VRTVTLIGGVVFLLFALSALFI.`	288
5	-10.800	`[O] COG0785 Cytochrome c biogenesis protein`	`ali follow..`	17	13	`TLALLSP-PAFFASSVGAGPRMILHGVVFYAGLLV------LLVPLGLGILGELFITQRQTIIVVSSIVLIILGFVQFDFGKALPGLDRLQSKATVTSGLGKSFLLGMTSSIGFCSGPILGAVLTLAATSGNSITSALILSAYGAGMVLPLMAIAALWMLRGREFTFLGRQWHIVSVISGALIIAVGILFWSTN`	222
6	-10.500	`[R] COG2215 ABC-type uncharacterized transport system, permease component`	`ali follow..`	14	90	`VFHAAGPGHGKAVISETELKRGVLLSFLSSILQGVVAILLIGAVYLVLRGSSISMTNATRALEIASYALIAAFGGWLVFRKLRSHAPDPALLKGDRFALSEAWSAIVAVGLR-PALIVLSFALLNGLYLGGVLSVFAMSIGTAITVSILATMAVTAIAVRYASSDSAAARISNGIEIAGALLVLLLGLVLLGA.`	340
7	-10.100	`[P] COG4300 Predicted permease, cadmium resistance protein`	`ali follow..`	14	13	`IILYSGTAVDLLIILMLAKRKSRKDIINIYLGQFLGSVSLILLSLLFAFVLDYIPSKEI--LGLLGLI--ILLGIKVLLLGDSDGEAIAKEGLRKDNKNLIFLVAMITFASCGADNIGVFVPYFT-----TLNLANLIVALLTFLVMIYLLVFSAQKLAQVPSVGETLEKYSRWF---VAVVYLGLGIYILVEN`	197
8	-9.380	`[P] COG0672 High-affinity Fe2+/Pb2+ permease`	`ali follow..`	10	383	`LLIIVREGLEALLIVAAIVAYLVKNN-LIRQSVVVALIA-SVLTAFIFQWLFANSGQSRELLEMIAVVMLFSMSYAYLEGKFAKSLSSGSIIGLWLTSFLAVYREGA-------ETVLFYLALIGDANTTSGHLSVLAGFGVGCVILLVAYLVMRFTVVKLP----------KPFFIFTGGFMYLMAFVFA...`	577
9	-8.930	`[OC] COG4232 Thiol:disulfide interchange protein`	`ali follow..`	12	175	`IGIAFTP-P-SGIVLGGKQRLSTARALLLTFIYVQGMAL--TYTALGLVVAAAGLQFQAALVLIGLAIVFTLLAMSMFLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLISPCTTAPLSAILLYIAQSGN------MWLGGGTLYLYALGMGLPLMLITVFGNRLLPKSGPWMEQVFGFVILALPVFLL...`	377
10	-8.530	`[S] COG1971 Predicted membrane protein`	`ali follow..`	13	8	`LALAFAVSLDSFGV---GLTYGRKMKIPFKSLLFIAGCSAVSILIAMGFGMTIQQYLSPAIAESLGGIILILIGCWALYQAFRPAKNGHKTKDDHVILNFEIKMLGVVIRILR-EAVILGIALSLDAFGAGIGAALIGFHPLYMAVSVAVMSALFVSLGMKSGYRFADSYWIKRFSFIPGLLLVLIGVFNLM..`	212

FFAS is supported by the NIH grant R01-GM087218-01

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