FFAS03 results for PF03519

Query: PF03519.14; W0HTY6_9GAMM/17-94; Invasion protein B family, from PfamA32U

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 .`
#	Score	Template	Links and tools	%id	First	`GCDPSLLGNFDSHSTIALDFNDMPSIYISSSDDDIWLWSRIAEYQDTILEQCSYNLLKELLEGAEYIRGGHFSLAENE`	Last
1	-7.260	`[S] COG4681 Uncharacterized protein conserved in bacteria`	`ali follow..`	15	61	`.................LCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVAL.................`	104
2	-6.300	`[R] KOG0322 G-protein beta subunit-like protein GNB1L, contains WD repeats`	`ali follow..`	12	11	`.....SLRSPDMGAVNSLCFQESDRLLAGTIKGSVFLWDLQTNRSALHFEVGSDPITSLHHTPDRLVTQEK.......`	76
3	-6.100	`[L] COG1662 Transposase and inactivated derivatives, IS1 family`	`ali follow..`	20	3	`..........................FSSGKKNKLWLWKAYDRVTGRLIDNRDSQTLSRLLERLA.............`	45
4	-5.920	`[A] KOG0268 Sof1-like rRNA processing protein (contains WD40 repeats)`	`ali follow..`	9	55	`..AKPFLASLDGHRCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRF...............`	119
5	-5.780	`[R] KOG0302 Ribosome Assembly protein`	`ali follow..`	18	380	`......VASFKWHRAPIYSIEWHPNIGVVGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIHMGQQEIKEMH`	455
6	-5.290	`[S] COG5426 Uncharacterized membrane protein`	`ali follow..`	16	188	`.............SQVLAEINGDPLLVCCFASDCSPHWGSPQFLQWEHYATFWCNVLHTIKK................`	245
7	-5.180	`[E] KOG0280 Uncharacterized conserved protein`	`ali follow..`	17	268	`..IDASKRIFKEHESMCYGGDWRHTATCSFYDKRVCLWEDI.....................................`	310
8	-4.870	`[T] KOG2381 Phosphatidylinositol 4-kinase`	`ali follow..`	15	536	`...DYIIRNTDRGDNWLIKYVNSAFIRIAAIDNGLAFWAWLPQAKIPFSEEIKEQVLPQLSD................`	609
9	-4.740	`[S] KOG0296 Angio-associated migratory cell protein (contains WD40 repeats)`	`ali follow..`	11	50	`..MDMSVQGFFEHKSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSF...............`	114
10	-4.720	`[S] COG1935 Uncharacterized conserved protein`	`ali follow..`	8	8	`GISRNVIEELMRRNIRTIELRSAHNVATALPGDCVF----LTPARINDLGRGVSGLVAEVRG................`	68

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster