FFAS03 results for PF08521

Query: PF08521.10; B1Y781_LEPCP/20-172; Two-component sensor kinase N-terminal, from PfamA32U

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150`
#	Score	Template	Links and tools	%id	First	`VGLLVAINTWSLYHQALRSADTAYDRTLLASAKSIGELLEVTGNSDALQVRANVPYSALEAFEADNRSRIFFKVSGFGGEMVSGFEDLPAWQGRIPVRGPYAALVDFYDDHYRGEPVRVAVLLQPVSGQAGQGMATIQVAETLELRQTLARQM`	Last
1	-8.540	`[R] COG3726 Uncharacterized membrane protein affecting hemolysin expression`	`ali follow..`	10	18	`ICLALLVLLMQGASYFSLSHQLARSEQVEELAQTLAKQVAFSLSPIMDSGDDNIDSQKVDAILQQLTQSLDASVYQIDGTLVASAGE..................................................................`	107
2	-7.730	`[T] COG2770 FOG: HAMP domain`	`ali follow..`	9	17	`SEAVVGLFGWSQREPIRREVMRQIKTQQTALVRESANNLRQRLDIYLGLLEITSPEQEAAFNASIAPAAGLFDLATADGTVTAVSPYRE-----GVIGINIADRDYFKQVMVVDQPT----ISAPLRNRVGGEPVVTFAAPVHDREGRIIGLI`	173
3	-7.140	`[T] COG3614 Predicted periplasmic ligand-binding sensor domain`	`ali follow..`	9	28	`LIFLIIFGGVAVAHWRIEMVSQQMRQQLLSQVEMVSLNLNFRLFQELSFTPQDLENPSFQRLHNQFEHRSIYTMVIRSGKILFGPDSLKSGDFLARDPGAVYKNP................................................`	139
4	-5.380	`[R] KOG3536 Adaptor protein CED-6, contains PTB domain`	`ali follow..`	7	121	`..........VRFLGSMAVKTDSTTEVIYEAMRQVLAARAIHNIFRMTESHLMVTSQSLRLIDPQTQVSRAFELTS------------------------------VTQFAAHQENKRLVGFVIRVPESTGEESLSTYIFESNSEGEKICYAI`	234
5	-5.250	`[M] KOG3396 Glucosamine-phosphate N-acetyltransferase`	`ali follow..`	12	2	`..................SSISIFDEILLPTDISVPTGLRLRALRNDDFGYLEL-RKQFDAMKKAKSYYIVVLEHIESSKIIGAATLLIEFKYIHEAGTRGRVEDVVVDEKMRGKKLGALLNEVLVEMAKTIGVYKLSLECKTELIP......`	144
6	-5.070	`[V] COG3725 Membrane protein required for beta-lactamase induction`	`ali follow..`	12	75	`LLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLLIVGGTWGPVTLMGYAFLRAWQYWLARYQTPHHRLQSGIDLDWVPVRLAGVVYALIGH........................`	213
7	-5.050	`[T] COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism`	`ali follow..`	10	29	`LFSVLLVVHLIYFSQISDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAV--RKRNDLLFIVVTDMQSLRYSHPEAQRIGQPFKGDDILKALNGEENVAINRGFLAQALRVFTPIYDENHKQIGVVAIGLELSRVTQQIND.`	178
8	-4.960	`[T] KOG3884 Neural proliferation, differentiation and control protein`	`ali follow..`	13	343	`TVGLLALGVTWFHNRHKAAADVEYDRKLAQSAQMYHYQHQKQQIIAMENQATDGSCGMSDVESDDDNEEGDYTVYECPGLAPTGEMEVKNPAAAATNNNITQATPQQPATLKKGTVKPNINL---ATGTAAAAASAASAASATGGEEPKQKR.`	532
9	-4.720	`[S] COG4104 Uncharacterized conserved protein`	`ali follow..`	14	131	`.......................................................................VRVWSSGGWNAFDTTD-------------------------DGMTSWIER--------PTAEILYIDLVQRCDA........`	172
10	-4.690	`[S] KOG4528 Uncharacterized conserved protein`	`ali follow..`	11	42	`...........KYEYLDHTADDTLEEAFEQCAMAMFGYMDTGTVEPLQTVEVETQGDDLQSLLFHFLDEWLYKFSADEFFIPREVKVLSIDQRNFKLRSIGWGEEFSLSKHPQGTEVKAITYSA------------MQVYNEENPEVFVIIDI`	179

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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