FFAS03 results for PF11695

Query: PF11695.8; Q9A5F4_CAUVC/31-168; Domain of unknown function (DUF3291 topsan), from PfamA32U

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 .`
#	Score	Template	Links and tools	%id	First	`LAQVNVGRLKAPIDHPMIKDFADNLDRINALAEASPGFVWRLTGEGNNATDLAIDSDPLFIPNLSVWSDIPSLGAFVYRSGHVEIMRRRREWFEHMDLYMALWWVPAGHTPTVEEALEKLAHLEAHGPTPAAFTFKVP`	Last
1	-13.400	`[S] COG3224 Uncharacterized protein conserved in bacteria`	`ali follow..`	10	18	`.......HFAHRVTPDHHEIFLECQEQLKILVTKYPGYI------SSESTELRSEGDIFVAETVIRFDTLENFMGWIDSPERRQLIYLEENAGYQFEGKVNTWLKRKLSKPVWKINLLVLLVL...............`	134
2	-11.800	`[R] COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides`	`ali follow..`	14	1	`...MIYEIAMLPVQKDKISEFRQAFGDVVPLLKRARGYRGHVLAQG--------VETPEVFNLIVRWRSLNDTPGFEASEDHEQFMEGIQDYFSG...........................................`	85
3	-11.500	`[S] COG1359 Uncharacterized conserved protein`	`ali follow..`	13	1	`...MLIQMVSINVKQGHAADFLEAFRINYEGTRQEPGNLRF--------DVLRNPDDDHSFVIYEVFKSPEALDAHR-KTEHYQECVRRIDPILAGPRTKTFYNVEMADFLAAGQA......................`	104
4	-6.230	`[S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb proteins`	`ali follow..`	13	335	`.VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN------TIRLWDIECGACLRVLEG-HEELVRCIR-VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE.`	468
5	-5.830	`[P] COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit`	`ali follow..`	18	11	`.......................................................DAQGYLKNSTDWSEAAEQEGITLTEPHWEVVRFVRAFYQEFNTSPAIRMLVKAMAQKYGENSRYLYRLFPKGPAKQATGLPKP`	104
6	-5.800	`[U] KOG3325 Membrane coat complex Retromer, subunit VPS29/PEP11`	`ali follow..`	9	102	`..............................................................SLALLQRQFDVDILISGHTHKFEAFEHENYINPGSATGAYNALETNIIPSFSTVVTYVYQLIGDDVKVERIEYKKP`	186
7	-5.750	`[L] COG3293 Transposase and inactivated derivatives`	`ali follow..`	11	7	`..............................................................SDFEWHVIKPLLPNKPRGVPRVDDRRVMNGIFWVLRSGAPWRDLPERYGPRTTCYNRFVRWRKASVWDRLMD....`	78
8	-5.690	`[A] KOG3408 U1-like Zn-finger-containing protein, probabl erole in RNA processing/splicing`	`ali follow..`	16	65	`..................................................................FDSSQALLVHKKGKVHKRRLKNLRE...............................................`	89
9	-5.690	`[R] COG5112 U1-like Zn-finger-containing protein`	`ali follow..`	16	65	`..................................................................FDSSQALLVHKKGKVHKRRLKNLRE...............................................`	89
10	-5.640	`[R] COG0790 FOG: TPR repeat, SEL1 subfamily`	`ali follow..`	11	196	`.MDYQMGRLTLN-RPASLKWFRAAAEKGVVEAQSLLGGIY----SGGEGDEWGIKPDIQEAQK---WYGQAAKQGDSDAQIALGKIYYSGATGRTDYAKALALFTQVENDGTNSRSTMPLSWMYYNGLGDKAWSY...`	339

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster