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current user: public |
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Query: PF15432.6; F2I912_AERUA/17-140; Accessory Sec secretory system ASP3, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 | |||||||
# | Score | Template | Links and tools | %id | First | YAYGSQIVLENPDHIHFKNTLMPSGERITSWSSRSVFQTTKDSAKLPLLTRGESYQLIFQGKTVPEGSIFFKISFFDYYGGPIEEYYLRTPSDYFTVPDTYNYYEIALHHGGCLSLDFNQIILV | Last |
1 | -7.680 | [K] KOG2473 RNA polymerase III transcription factor (TF)IIIC subunit | ali follow.. | 11 | 12 | .....NLPSKEAFVVHYPGYPSSISRAVETLGGIQGITTARESTSNKLFRPEDPSAHPAYGERRHCNGFLLKISKEDVKKDSLPESQPVISTSDACLPEVRPALCADIVARVSESYCFDGMV.. | 131 |
2 | -6.430 | [P] COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport | ali follow.. | 16 | 29 | FAYTVTIRNLGRAPVQLLG---------RYWLRETEVQGEGVVGVQPRIAPGEEYQYTSGAVITPLGTMQGHYEMIDENGDAFTIDI..................................... | 113 |
3 | -6.040 | [O] KOG0552 FKBP-type peptidyl-prolyl cis-trans isomerase | ali follow.. | 10 | 269 | ...GASATNGKKVEMRYIGKLLGRGEVIRGWDV-----------GVAGMQEGGERKITIPAP----------MAYGNQSIPGIP-------------KNSTLVFEVKLVRVH............ | 361 |
4 | -5.860 | [T] KOG2437 Muskelin | ali follow.. | 9 | 341 | YTLGRYLDSSVRNSKSLKSDFYRYDIDTNTWMLLSEDTAADGGPK--YTFGGRNLTCNGGVDDSRASEPQFSLFAFNCQCKTWKLLREDSCNAGPEDIQSRIGHCMLFHSKNRCLYVF...... | 473 |
5 | -5.660 | [S] COG1679 Uncharacterized conserved protein | ali follow.. | 12 | 133 | ..FGDHLAWAESSAIVYANSIIGAGVHIKELAAAGYKAGRELRDQIPYFVFDRSVTEEELKLLGAALAATGNTVMFHAENYTPEWKDFEKPAEKIEVDRLERACEPDLITIGCPHASVREL... | 287 |
6 | -5.470 | [P] KOG4408 Putative Mg2+ and Co2+ transporter CorD | ali follow.. | 10 | 306 | FTYRIRIEMSKDALPEKACQLDS-----RYWRDVEEVQGPGVVGEFPIISPGRVYEYTSCTTFSTTSGYMYTFHFLYFKDKIFNVAI---PRFHMACPTFRVSIARLV................ | 414 |
7 | -5.360 | [ZUD] KOG2101 Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s) | ali follow.. | 17 | 3 | YTFSTNL----DNFLFLPN----SGCPFF-WGSEINFEASN---KINQLKRSKIFNKKKSKNKLENEFQFLNFQFF-QKNEIIQPKFQKKNATFFSI--------ISVF............... | 96 |
8 | -5.350 | [S] KOG4478 Uncharacterized membrane protein | ali follow.. | 6 | 60 | .........PPGSQKTPHDVVAMGVKGAKILSLSSSLAG---VVMVPVLSSYLWEAAAERPSMMMFAIVANTFLVLLSFTPLLLHFLAKRFPIDIFYNNDKKVFTTVHYNMQKQALRFSASEVV | 173 |
9 | -5.220 | [G] COG4692 Predicted neuraminidase (sialidase) | ali follow.. | 9 | 228 | ......MLLRSTRGAIFRSDSIDYGA---TWSVATSLPNNNSGIDLVSMQDGTLILALNPVNGNWGKRYPLSLIASQDNGES-PLLDLESDHGEYSYPAIISE-IVHITTWNRKNIVYCRLQTV | 347 |
10 | -5.200 | [NU] COG3121 P pilus assembly protein, chaperone PapD | ali follow.. | 11 | 29 | .PDRTRLVFRGEDSVDLKNANSKLPYLAQSWVE----DEKGVKITSPLIVVPPVQRI------EPSAIGQVKIQGMPALASL------QDRETLFYYPQSDKPNTLQIALQTRIKVFYRPQALS | 145 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |