FFAS03 results for PF16620

Query: PF16620.5; L5L3U3_PTEAL/250-410; Unstructured linker between I-set domains 2 and 3 on MYLCK, from PfamA32U

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160`
#	Score	Template	Links and tools	%id	First	`QGLDNANRSFVRGTKAANSDIRKEVTNGIAQEPKMDSLETIAESKNCSSTQRGGSPTWATSTQPQPLRESKLDLFEDSSRKALRTPVLQKTSSTITLQATKVQPEPRAPVSGPFSPGEKREKPAAPPPATLPTRQSGLRSQEVVSKVATRKIPMESQRDST`	Last
1	-9.510	`[R] KOG1777 Putative Zn-finger protein`	`ali follow..`	11	1	`..MSSSSSPFFHPPPQQVMD--DTTQQSPSYSQNSNSPSQHTFESMEPAAGGSTSMRYSPSSEADNPTLGLFSAQASYPYSLRKRRPCLTFPITAATADETPQPTMKKFKLECLSPGEARDFSIEDESGTNLEAKMETTECEPEEEEAVERLPEE......`	168
2	-9.310	`[TV] KOG3966 p53-mediated apoptosis protein EI24/PIG8`	`ali follow..`	10	361	`....AMQRQQYELQQRQRLLQRDEQLLKQRKQQYVQQQRLQQEQLMRRDRSHSRSQTPQLGHPHRYAQAPVFDAGRVRDSSASSTHSSNAPSINSHRPPPYYGSSLRGAAPLVPTPVPGAPRAPLTPPVIRQESGPDD.......................`	494
3	-8.810	`[S] COG5291 Predicted membrane protein`	`ali follow..`	2	213	`.........................EHPSSCCKARKGITIREGRERHERNMGYSNASTTSGDSMASLTDMADTKSSTENSAVTEESQCCAESFKDSSVVSSQKSMAVSTVVGSSTEAKNNYLDFTEALCDKEVVAEQNPESQSNEEWDEKWGDSDNESECS`	348
4	-8.130	`[S] COG5373 Predicted membrane protein`	`ali follow..`	8	23	`.................................SAERLDREIESLKAEIARLAKEGMGEPGPDLATGRPSEAGVPSVAGTEATADGPWSRAREGAGTSHDESAAGRESGDGAIDGPVAPSAAAARAESLES..............................`	120
5	-7.770	`[R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)`	`ali follow..`	9	795	`....PASKRKLSSKDVEQAADAPEVLTHSDNAVDVGIIDDECGGFGAVGVMNGVASPVANNSEMDTEAEVEAEPTATKAITIHCQQ--PVTTPVAAAATANERLPGVAPHRRGPRRADRREEELVASAPGYRCRPSMRGADAGAAAAAAAAPTHPHPHRPP`	949
6	-7.730	`[S] KOG2890 Predicted membrane protein`	`ali follow..`	9	256	`....................ARMGVCKRQVRHVDLHSLQSGSVGINLPALENSAKDSERRRQKALKELNDRLNKTRTAEVASYGNWDDGDDDEPTEVTVVAPPPVSNVHSSKPAMDKESMA........................................`	356
7	-7.350	`[S] KOG4610 Uncharacterized conserved protein`	`ali follow..`	9	367	`....DKDYAEQEAVYSKKKKDKKDKKKRKRKDTGYSTASSQNLYSTKASGTDKDTRRKDKKGKKSKRTCSSSPSDCDLAKKQKRKNADKNDKKKSRKIEAVVEESSSSSSSSSDSSNSTLPSYEVIDEKKARRRKHRGSSSDTSSGDSSSSSSSSSSSDSS`	523
8	-6.880	`[FH] KOG2466 Uridine permease/thiamine transporter/allantoin transport`	`ali follow..`	6	3	`...................................DNLSLHLSGSSKRLNSRQLMESSNETFAPNNVDLEKEYKSSQSNITTEVYEASSFEEKVSSEKPQYSSFWKKIYYEYVVVDKSILGVSILDSFMYNQDLKPVEKERRV..................`	110
9	-6.740	`[S] KOG2490 Predicted membrane protein`	`ali follow..`	9	2	`.........................GSNTSPGQADPLESENESSLTSRFLPNKRDGGKDNESVIPEKEEPDLNEPVLAVPLPKSRYALTKRSSSSEYPRRSASTSAKKNVIPITRSYSTTFFSKTNDQPTVTGNQDKPISRLRASKLQIQNFWNYICFELL`	137
10	-6.600	`[U] KOG2376 Signal recognition particle, subunit Srp72`	`ali follow..`	10	523	`.............................LKAVDVDNLEKTSGAKPIEGISAASLSQEEVKKEKVKRKRKPKYPKGFDLENSGPTPDPERWLPRRERSSYRPKRKDKRAAQIRGSQGALTKVKQEEAPSTSKSKQAAISKANAAGPSSSKASKKKSRR...`	651

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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