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Query: gi|161375866|ref|NP_370532.2| histidine ammonia-lyase (SAV0008) [Staphylococcus aureus subsp. aureus Mu50], from S.aureus

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTLYLDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLYRGEEKDSDDVLRELNRQPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDVHSVRNFQEQINVAARMRDWLEGSTLTTRQAEIRVQDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSMGTTAARHGYQIIENARRVLAIECVIALQAAELKGVEGLSPKTRRKYEEFRSIVPSITHDRQFHKDIEAVAQYLKQSIYQTTACHLast
1 -4.010PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  11  1...................................................MYTIQANPSGTRSMEISEENLVTIEKYSLFQHLIDSNGIVDEAVLEK-LKLNIRSLIASQEEDSKDLLDLCIDVIYHNNMKAFGLQQLI............................................................................................................................................................................................................................................................................................................................................................................ 88
2 -2.610PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  86...............................................................................................................................................................................................LLNGDAADAAAVKAEQVKDSKTVESLGKELVAENAQGLDAAAVKLNEQADWYETHEKSLSKAV-----------------RAVVESKAAKRLDDAKTNLTAKLDEASKLLADSDGKVADN................................................................................................................................................................................................. 198
3 -2.380PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138;  ali follow..  8................................................................................................................................................................................................................................................................................KQRKPRSFDHKPIYYDQRRDELEKRIERIRREVEQEEQAELDGQSSSHDYSGYRPRIRGT............................................................................................................................................................................ 67
4 -2.150PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  10  7...................................................................................................................................................................................................................................................................................................................................................................................ISGRPGL---FEVHTQTRTGVVATSLVDGKRINANARNQVSLLSEINIYGLEKEVPLQEVLTMIHTKEEGKQCSVKPKSP----------ADELEAYFFDVFQDYDEERVYPSDIKKIIQ............. 113
5 -1.900HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;  ali follow..  85...............................................................................................................AFFSDNRLNQALAALRKSGAGTFPYKAILTPTNQNWNALQCFSEIRREHETIQKQLKGNKEQAEE........................................................................................................................................................................................................................................................................................................................................ 149
6 -1.890HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;  ali follow..  15  5.............................................................................DFVKLSNLTIGYTLPIRNNKYMKSLRVYVSGNGYSGLDPELDISNVQAPGVEYRDTYPTTRSFTFGVNIG..................................................................................................................................................................................................................................................................................................................................................................... 80
7 -1.300HGC00518 gi|162728471|dbj|BAAY01000490.1|2.0 TMP00574;  ali follow..  1.........................................................................................................................................................................................................................................................................................................................................................................................MDEAVAMAQDAIGLMLEDCEVCPKPSLPSAIHVDTGDFIAMIPFDMEEYQKQFKPVKKTLSIPGWLNDAAESAHINFSSVLQKGLKSELGMI................................... 92
8 -1.200HGC00787 gi|162657578|dbj|BAAX01002027.1|2.0 TMP01033;  ali follow..  1..............................................................................................................................................................................MEQTSPIQALLQQRTLLQIEYYTEKEAFRKQTEQMGMQRKVKRGDAWFPLRIGKSFYNSLEVFRTEDQDIEHFGRPVMFFKAGETKTAQTDGKTEKKMLKYFSFT--------GTVSYV---DGDRMVITVPDSAPLLELQQADVPVGVQLSFD------ETSYKMMFDALDRTMKAKNNRLAYLRDLFYSHRKAERYSFEP................................................................................................................................ 193
9 -1.090PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;  ali follow..  80.................................QLSRLLHLVASSVDGSRDIETIAHRVSGRFGREVSADNVRYLIEQKLDPLGVTVPEGREEEDISAPRSDLLLALKGHRVIFNERRVATIAGALAWLHRPVV.................................................................................................................................................................................................................................................................................................................................................................................. 180
10 -1.020PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  15  4............................................LLPLEAMEYEINKGAG-------NPLEFKGLKSQYLFIFAGGL--------VAVLLVVVILYIAGVNQWICIPFGLLSGSLLVWLTFRLNARYGEHG........................................................................................................................................................................................................................................................................................................................................................................... 85

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.