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Query: gi|15923007|ref|NP_370541.1| adenylosuccinate synthetase (SAV0017) [Staphylococcus aureus subsp. aureus Mu50], from S.aureus

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSSIVVVGTQWGDEGKGKITDFLAEQSDVIARFSGGNNAGHTIQFGGETYKLHLVPSGIFYKDKLAVIGNGVVVDPVALLKELDGLNERGIPTSNLRISNRAQVILPYHLAQDEYEERLRGDNKIGTTKKGIGPAYVDKVQRIGIRMADLLEKETFERLLKSNIEYKQAYFKGMFNETCPSFDDIFEEYYAAGQRLKEFVTDTSKILDDAFVADEKVLFEGAQGVMLDIDHGTYPFVTSSNPIAGNVTVGTGVGPTFVSKVIGVCKAYTSRVGDGPFPTELFDEDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKICTAYELDGKEITEYPANLDQLKRCKPIFEELPGWTEDVTSVRTLEELPENARKYLERISELCNVQISIFSVGPDREQTNLLKELWLast
1 -135.000d4m9da_ c.37.1.0 (A:) automated matches {Bacillus anthracis [TaxId: 261594]}  ali model 3D-neighbors follow..  71  1MSSVVVVGTQWGDEGKGKITDFLSEHAEVVARYQGGNNAGHTIVFGGVKYKLHLIPSGIFYKEKICVIGNGLVVDPKALLEELKYLHDRGVSTDNLRVSNRAHVILPYHLKQDELEEASKGDNKIGTTKKGIGPAYMDKAARIGIRMADLLDREAFKEKLEQNLAQKNRLFEKMYDTEGFSVDEIFEEYFEYGQQIAQYVCDTSVVLNDALDNNHRVLFEGAQGVMLDIDHGTYPFVTSSNPIAGGVTVGTGVGPAKVTRVVGVCKAYTSRVGDGPFPTELHDEIGHQIREVGREYGTTTGRPRRVGWFDSVVVRHARRVSGLTDLSLNSIDVLTGIPTLKICVAYKCDGKVIDEVPANLNILAKCEPVCEELPGWTEDITGVRSLDELPENARKYVERVSELTGIQLSMFSVGPDRNQTNIV.... 423
2 -6.560d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}  ali model 3D-neighbors follow..  11  17......................VGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRVEKNDLPFFLG-------------MQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLE-----GMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYDVSICLNAWCFEKDGAYNVTKGKALLEGYQS---VRPLSEAELEALPLLSR......................................................................................................................................... 266
3 -5.460d2lrra_ d.68.7.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  1....................................................................................................................................................................................................................................................................................................................................................................PEGVESQDGVDHFRAMIVEFMASKKMQLEFPSLNSHDRLRVHQIAEEHGLRHDSSGEGKRRFITVSKRA.. 70
4 -5.390d4e2za_ c.66.1.60 (A:) TcaB9 {Micromonospora chalcea [TaxId: 1874]}  ali model 3D-neighbors follow..  96.PDPFIVEIGCND---GIMLRTIQEAGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDPANVIYAANTLCHIPYVQSVLEGVDA--------LLAPDGVFVFEDPYLGDIVAKTSFDQIYDENFFLFSATSVQGMAQRCGFELVDVQRLPVHGGEVRYTLARQGSRTPSAAVAQLLAAEREMATLRAFAGNVVKIRDELTALLHRLRAEGRSVVGYGATASVYDTTQNRLPVRPASAFSDPYPDYALLFAWNHAEEIMAKEQEFHQAGGR-YVPE.................................................................................................................................................... 401
5 -5.380d4rv9a1 c.66.1.0 (A:6-420) automated matches {Streptomyces argillaceus [TaxId: 41951]}  ali model 3D-neighbors follow..  101.EGSFVLEIGSNT---GSQLKAFQNAGMRTLGIDPARNIAAVANERGIETLPEFFSVDTAALTPQLVLGRHVFAHIDDVSAVAEGVRD--------LLGPDSLFAIEVPYLVDMLERNEFDTIYHEHLSYIGVGSLVALFRRHGLRVVDVERLAVHGGSILVFVGLDEPVVEELIALEKERGLYEDATYERFARHVAEITAELTSMVRSLRAEGKRIAGYGAPAFCCDTTQGLVPVRSPEYAKTQAIDYYLLLAWNYGEEILAKEGPFLADGGR-PNPR.................................................................................................................................................... 407
6 -5.180d1h80a_ b.80.1.8 (A:) iota-carrageenase {Alteromonas sp., atcc 43554 [TaxId: 232]}  ali model 3D-neighbors follow..  10  26........DDFGANGNDTSDDALQRAINAISRKPNGG----TLLIPNGTYHFLGI----MKSNVHIRVESDVIIKPTWNGDGKNHRLFEVGVNNIV--------------------------RNFSFQGLGNGFLVDFKDSRRNYKISNFTIDDNKTIFASILVDVTERNGRLHWSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPHFVTNVSSVSCGSAVRSDSGFVELFSPTDEVHTRQSWKQAVESKLGRGCA---QKDACLDKAKLEYGIEPGSFGTVKVFD---TARFGYNADLKQDQLDYFSTSNPMCKRVCLPTKEQWSKQGQIYIGPSLAAVIDTTPETSKYDYDVKTFNVKRINFPVNSHKTIDTN... 442
7 -4.740d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}  ali model 3D-neighbors follow..  12  1MKKLYIITGPAG-VGKSTTCKRLAAQLDNSAYIEGDIVGGYRPPWESDELLALTWKNITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRDALRKKDEQMGERCLELVEEFESKGIDERYFYNTSHLQPTNLNDIVKNLKTNPRFIFC............................................................................................................................................................................................................................................................... 176
8 -4.550d2gqwa3 d.87.1.1 (A:309-400) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}  ali model 3D-neighbors follow..  12  12..........WSDQ-RIQVAGLASGDEEIVRGEVSLDAPKFTLLQKGRIVGATCVNNARDFAPLRRLLAVGAKPDRAALADPATDLR.................................................................................................................................................................................................................................................................................................................................................... 92
9 -4.530d2f3oa_ c.7.1.0 (A:) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  12  286............DIGEGRINRELAFDINLWIKTNGGCDIGNDATNELTYLMLEVTDRRLRQPNVHVRINKGS---PESFLKRLAEAISSGCNNLALFFDD---AAVKALKNAEVDDRDALNYTTDGCVEIAPFGNSFTSSDAALINVAKA-----LEYALNEGVDLQFGYEFGAKTEKPKFLEDLLEKLREQVSHIVKLVVRGSNVLSYANAE--SLCVEDCFEKGVDVSRGGARYNFTGIQAVGIADVGDSLVAIEMDDIVEACRK-SPKYGNDKYTKMVLEWYCEEVNRHRNFRGLPSGRKSGEPLNPGVSPSTGMDREGVTAVSASKLS----YENLPNGASLTINLSSDVLGEKGDAVIEALIKSSMELGVMH-NILKEDLLRKAQQEPEKYRWLLVRVAGWSAYFVELSRPVQEEVIRRISC 771
10 -4.450d1i6ua_ d.140.1.1 (A:) Ribosomal protein S8 {Methanococcus jannaschii [TaxId: 2190]}  ali model 3D-neighbors follow..  15  1.................SLMDPLA---NALNHISNCERVGKKVVY--------IKPASKLIGRVLKVMDNGYIGEFEFIEDGRAGIFKVELIGKINKCGAIKPRFPVKKFGYEKFEKRYLPARDFGSTTQGVMSHEEAKKRGLGGRL........................................................................................................................................................................................................................................................................................ 124

FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 8 9 3   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.