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Query: gi|15923005|ref|NP_370539.1| 50S ribosomal protein L9 (SAV0015) [Staphylococcus aureus subsp. aureus Mu50], from S.aureus

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKVIFTQDVKGKGKKGEVKEVPVGYANNFLLKKNYAVEATPGNLKQLELQKKRAKQERQQEIEDAKALKETLSNIEVEVSAKTGEGGKLFGSVSTKQIAEALKAQHDIKIDKRKMDLPNGIHSLGYTNVPVKLDKEVEGTIRVHTVEQLast
1 -70.200[J] COG0359 Ribosomal protein L9  ali follow..  31  25VKVVLNETINKLGFTGDLVEVAPGYARNYLIPKGLGVVATPGILRQVEQRRLKELERLKAEKDAAEARKVALETIGFVIKKQVGEAEAIFGTVTTQEVADAVEAATNQSLDRRGISL-PDIHKTGFYQAQIKLHPEVIATVEVQVAP. 171
2 -69.500[J] KOG4607 Mitochondrial ribosomal protein L9  ali follow..  20  44LEVILTTGIEKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIREQRKMYNHEEVKEEVKVVHKTSEVQKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKIDPDNVVLAAPLETFGEYEVPLKFPKTIPLPQGTVQWI. 213
3 -6.270[S] COG3881 Uncharacterized protein conserved in bacteria  ali follow..  12  10LPVIDRQTGNELGSVMDGVNKNGWFHRHQWLPLDHIISLGTDGVMIEAKGLSKEISTNGGAAYPLMHGQHKLQGKPL-----ITEEGERLGLVQDVYFLEKAGKIVAYEVTERKVVRSNGPVTVGKDVLIVSM............... 157
4 -5.530[S] COG5556 Uncharacterized conserved protein  ali follow..  12  23.............................................................................................SPSTVAASVKRELGIEVSRQLVESHDPSKKAAG...................... 55
5 -5.530[P] KOG4656 Copper chaperone for superoxide dismutase  ali follow..  12  156......AEERHAGDLGNIRADENGRATFRFVDPVLEVWDIIGRAVVLTANADDLGRGGNDQSLIDGNSGERIACGIIARSAGILENFKRICACDGVTLWDERNKPLAGKERSQKL................................. 264
6 -5.440[T] KOG4603 TBP-1 interacting protein  ali follow..  11  44.KAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELK--------------ELSSALTTPEMQKEIQE-----LKKECAGYRERLKNI........................ 147
7 -5.410[E] COG4812 Ethanolamine utilization cobalamin adenosyltransferase  ali follow..  10  2KDFITEAWLRANHTLSEGAELPAD-ARELLESRHLRIKFIDEQGRLFVDDEQQQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAE........................................................ 100
8 -5.170[Q] COG3473 Maleate cis-trans isomerase  ali follow..  15  61.............................MAPEGVSIHTGRVPLEKVS------VEELLKMEEYSAIEAEKLATAGVDLIVYGCTTGSLIGPGYDLKIADKLSSASGVQVVTTATAVVEALKALGASRIAV................. 157
9 -5.050[J] COG4352 Ribosomal protein L13E  ali follow..  12  5..........................VKGQLPNAHFHKDWQRYVKTWFNQPGRKLRRRQARQTKAAKIAPR-PTIRYNMKVRAGR-GFTLEELKAAGVSRRVASTIGIPVDHRR-SLQRNVERIKVYLAHLIVFP............. 127
10 -4.920[S] KOG4528 Uncharacterized conserved protein  ali follow..  7  39....VNRKYEYLDHTADVQLHAWGDTLEEAFEQ-----CAMAMFGYMTDTGTVEPLQTVEVETQGDDLQSLLFHFLDEWLYKFSADEFFIPREVKVLSIDQ-SIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEENPEVFVIIDI... 179
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205