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Query: gi|33438755|ref|NP_878039.1| Putative protein of unknown function; identified by expression profiling and mass spectrometry; Yal063c-ap (YAL063C-A) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .
# Score Template Links and tools%idFirst MCPRTVLLIININHWFYDKNIVRIILTFRLDSGHISDICFINKNLANALITADISLLKRHDIRCTKYIITYYQRYRNKEKGKFISLCKNTIISSSVLast
1 -6.220[K] KOG3152 TBP-binding protein, activator of basal transcription (contains rrm motif)  ali follow..  11  49...RGVCYLSRIPPHMDHVRLRHILAQY----GELGRIYLAPEADTFVYCYSDSEAQVHRKRAGGFRGQRFWVEFAKKSVAKRVADMLNG...... 134
2 -5.630[S] KOG3831 Uncharacterized conserved protein  ali follow..  18  596.......VVFTLLYSFATTLLIRALGNFEISLATSNAMMLMGSLLSVLLVMVTVALHQHEDLRCNQLVVYHLY---------YIAL--NTAIS... 675
3 -5.550[H] COG2154 Pterin-4a-carbinolamine dehydratase  ali follow..  43...MQLEKVYLFKNFKHALAFTNAVGEISEAEGHHPGLLTEWGKVTVTWWSHSIKGLHRNDFIMAARTDEVAKTAEGRK................. 118
4 -5.440[K] KOG4073 Pterin carbinolamine dehydratase PCBD/dimerization cofactor of HNF1  ali follow..  19  11...AEKLQPLLDAGWTLVEGRDAIFKQFVLKDNHHPEWFNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTANLLK.................... 101
5 -5.270[A] KOG4849 mRNA cleavage factor I subunit/CPSF subunit  ali follow..  12  92...RYQLYVGNLTWWTTDQDIANSLRDIGVSD--LQEVKF-FENRANG--SKGFSVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQ.. 178
6 -5.170[CO] KOG3996 Holocytochrome c synthase/heme-lyase  ali follow..  18  242..GENVPIMVQVHNFLNEGAWSEILLRFEGNANKRTPRALWYMMLGRINPNRWGSGFDRHD-RKVRYVIDYYEAPDSADGKPVFSLDVRPAVDS.. 357
7 -5.100[V] COG2720 Uncharacterized vancomycin resistance protein  ali follow..  19  214.......................IISGGTLALEDGGGICQVSTTIFRALWEAGLPIVERNQ----SYRVHYYDRMKNDTDAYIFIQASWNTATQKL 298
8 -4.930[O] KOG2884 26S proteasome regulatory complex, subunit RPN10/PSMD4  ali follow..  13  1MVLESTMVCVDNSEYMRNGDFVNIVCHSKTRSNPENNVGLIKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRL...... 131
9 -4.810[P] COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit  ali follow..  12  12..............................AQGYLKNSTDWSEALAPVLAEQEGITLTEPHWEVVRFVRAFYQEFNTSPAIRMLV........... 66
10 -4.800[AJ] KOG3387 60S ribosomal protein 15.5kD/SNU13, NHP2/L7A family (includes ribonuclease P subunit p38), involved in splicing  ali follow..  13  34............................QLRKGANEATKTLNRGISEFIVMAALEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACS.. 103

FFAS is supported by the NIH grant R01-GM087218-01
1 3 6 9 0 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Q, Zmasek CM, Dishaw LJ, Mueller MG, Ye Y, Litman GW, Godzik A. Novel genes dramatically alter regulatory network topology in amphioxus. Genome Biol.2008 Aug 4;9(8):R123.