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Query: gi|33438754|ref|NP_878038.1| Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; Yal067w-ap (YAL067W-A) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst MPIIGVPRCLIKPFSVPVTFPFSVKKNIRILDLDPRTEAYCLSLNSVCFKRLPRRKYFHLLNSYNIKRVLGVVYCLast
1 -5.030IDP91344 hypothetical protein VV2_0026 [Vibrio vulnificus CMCP6] VV2_0026 [Vibrio vulnificus CMCP6]  ali follow..  22  29..........LRPFAYDLRLPIALKQSVRSLQVKPQGVIYADLFEQISLRKTPMPKKLELVKS............ 89
2 -4.890IDP00791 superantigen-like protein SACOL1178 [Staphylococcus aureus subsp. aureus COL]  ali follow..  17  167........................KPVLTLKEIDFRAREALIKNKILLSKRLHSDLANVYVKNPNKITV...... 233
3 -4.820IDP05142 isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne] BAS2027 [Bacillus anthracis str. Sterne]  ali follow..  15  226............PWTLPANVALAVHPNMEYVKAKQEGHVYIVAKERV------LKENYEVLSVHKGEELLNISY. 284
4 -4.640IDP91814 gene: mdh; malate dehydrogenase, NAD(P)-binding [Escherichia coli str. K-12 substr. MG1655] b3236 [Escherichia coli str. K-12 substr. MG1655]  ali follow..  10  3VAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHI............................ 49
5 -4.630IDP00770 superantigen-like protein SACOL0473 [Staphylococcus aureus subsp. aureus COL]  ali follow..  17  160........................KEEVSLKELDFKIRKLLIEKYRLLSEKLSFERMFDVMDSKQIKNI...... 227
6 -4.590IDP02546 gene: neuA1; acylneuraminate cytidylyltransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1143 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  18  104........CKQYPSFIPVKYPHEV-----QIENPQSEENKLHSYYNYVASFIPQDEWLIKIDVYDAKKLYKSFY. 167
7 -4.480IDP91143 superantigen-like protein [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00393 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  17  160........................KEEVSLKELDFKIRKLLIKKYKLLSDKLDFERMADVINSEQIKNI...... 227
8 -4.350IDP00895 gene: grxB; glutaredoxin 2 STM1165 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  20  1MKLYIYDHC---PFCVKARMIFGLKNPVELNVLQNDDEATPTRMIG--QKMVPILQKRYLPESMDIVHYVDNLD. 73
9 -4.320IDP04114 conserved hypothetical protein [Yersinia pestis CO92] YPO1611 [Yersinia pestis CO92]  ali follow..  14  8........SKIIRREIPADVVYQDELVTAFRDIAPQAPTHIL................................. 41
10 -4.290IDP06464 gene: I6L; I6L [Monkeypox virus Zaire-96-I-16] NP_536494 [Monkeypox virus Zaire-96-I-16]  ali follow..  24  270....................PYIPKKIVSLLDLPSNVEIKAISRSGV--------DFITHINNKRLTTILVIA.. 314
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24