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Query: gi|6319279|ref|NP_009362.1| Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration; Cdc19p (YAL038W) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSRLERLTSLNVVAGSDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVVDDKTLKVKALNAGKICSHKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDTYVSIQGFKAGAGHSNTLQVSTVLast
1 -123.000IDP91824 gene: pykF; pyruvate kinase I [Escherichia coli str. K-12 substr. MG1655] b1676 [Escherichia coli str. K-12 substr. MG1655]  ali follow..  42  1.................MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKT-GKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSV--IGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAI-EGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNR----KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKE------ITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL 470
2 -123.000IDP00605 gene: pyk; pyruvate kinase SACOL1745 [Staphylococcus aureus subsp. aureus COL]  ali follow..  43  1.................MRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRL-DKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMNEV---EGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIAEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVET--SLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKG------RKSTDALLNNAVATAVETGRVSNGDLIIITAGVPTGTGTTNMMKIHLV 472
3 -122.000IDP90253 gene: pyk; pyruvate kinase [Staphylococcus aureus subsp. aureus MRSA252] SAR1776 [Staphylococcus aureus subsp. aureus MRSA252]  ali follow..  43  1.................MRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRL-DKIVAILLDTKGPEIRTHNMKDG-IIELERGNEVIVSMNEV---EGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVET--SLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKG------RKSTDALLNNAVATAVETGRVTNGDLIIITAGVPTGTGTTNMMKIHLV 472
4 -121.000IDP02363 gene: pyk; pyruvate kinase [Francisella tularensis subsp. tularensis SCHU S4] FTT1366c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  33  1.................MRRTKILATLGPASESREALTEMIKAGVNAVRCNFSHGSAEDHRKRVDLIRQIAKEQ-DTHVGILADLQGPKIRLSKFKNG-SVEIKKGQKFTLDADLG-INDGDENTVGIDYKELIQDVKKGDILLVDDGKIVLEVDSV-KGNKAVTKVVVGGKVSNNKGINKKGGGLTAPALTEKDKEDIKIAAMLQVDFLAVSFVRDGKDMEYARQLVHEAGWRPAMVAKIERAEAVDNLKSIVDASDLVMVARGDLAVEIGDENVPTVQKLIISTARRNEKGSITATQMMESMIENSSPTRAEASDVANAVFDGTDAVMLSAETAVGKYPVETVSAMSRICKSAEKSKYTHISKKQKIA---DCDRIDHAVSVAAVKIANDIGAKGLIVLTEGGNTSRWMSRINTDLPIYALSRNATTLGAMTLFRGVVPIYFDSTRMSK-----LYVNRSACMELESRNLAKDGDIFVLTSGDSMGHGSTNKIKVIIA 474
5 -119.000IDP00019 gene: pykA-2; pyruvate kinase BA_4843 [Bacillus anthracis str. Ames]  ali follow..  41  1.................MRKTKIVCTIGPASESIEKLEQLIEAGMNVARLNFSHGSHEEHGARIKNIREASKKT-GKTVGILLDTKGPEIRTHDFVDG-QAELVTGAEVVLSTEQV---LGTAEKFSVSYAGLYDDVDPGSRILIDDGLIELEVIEK-ADGNIRTKVLNSGTVKNKKGVNVPNVSIKLPGITEKDVKDIIFGIEQKVDFIAASFVRKAADVLEIRELLEEHNQYIQIVPKIENQEGIDNIDSILEVSDGLMVARGDMGVEIPPEEVPLVQKRLIKKCNVLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGQYPVEAVTMMANIAVRVEKSLQYEDMFKKRIK--EFTPTITDAISQSVAHTALALDVAAIVAPTESGYTAKMISKYRPKSPIVAVTSDEQVGRRLALVWGVQAFMAEK-----RAASTDEMLDTAIQTGMDAGLIGLGDTVVITAGVPVATGTTNLMKIHVV 472
6 -116.000IDP91823 gene: pykA; pyruvate kinase II [Escherichia coli str. K-12 substr. MG1655] b1854 [Escherichia coli str. K-12 substr. MG1655]  ali follow..  35  2..............SRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKL-GRHVAILGDLQGPKIRVSTFKEG-KVFLNIGDKFLLDANLG-KGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEV-QGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVDAMDDIILASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDV---QFDNVEEAIAMSAMYAANHLGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDS------ANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSVGSTNTTRILTV 479
7 -113.000IDP06306 pyruvate kinase [Streptococcus pneumoniae TIGR4] NP_345384 [Streptococcus pneumoniae TIGR4]  ali follow..  36  3..................KRVKIVATLGPAVESAKNIAKLIEAGANTFRFNFSHGDHQEQGERMATVKLAEKIA-GKKVGFLLDTKGPEIRTELFEGEKEYSYKTGEKIRVATKQGI--KSTREVIALNVADIYDDVEVGRQVLVDDGKLGLRVVAKDATREFEVEVENDGIIAKQKGVNIPNTKIPFPALAERDNDDIRFGLEQGINFIAISFVRTAKDVNEVRAICEETGNHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVYQKMIIKKVNAAGKVVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPLESVTTMATIDKNAQALLNEYGRLDSD---SFERNSKTEVMASAVKDATSSMDIKLVVTLTKTGHTARLISKYRPNADILALTFDELTERGLMLNWGVIPMLTDA------PSSTDDMFEIAERKAVEAGLVESGDDIVIVAGVPVGAVRTNTMRIRTV 500
8 -8.710IDP00119 gene: citE; citrate lyase beta chain NT01ST0753 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  28....................................................................................................................................VSNSFIYPADALMFDLEDSVALREKDAARRLVYHALQHPLYRDVE------TIVRVNALSEWGVNDLEAVVRGGADVVRLPKTDTAQDVIDIENEILREPGSTGLLAAVESPLGITRAVEIAHASEGIALGAEDYVRNLRTEELLFARCAILQAARSAG---IQAFDTVYSDANNEAGFLQEAAHIKQLGFDGKSLI----------NPRQ-IELLHNLYAPTRKEVAHARLVVEAAEAAAREGLGVVSLNGKMVDSPVIERARLVLSRAEL................................................................................................ 296
9 -7.050IDP90546 gene: pyrF; orotidine 5`-phosphate decarboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0381c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  12  1............................................................................................................MKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIEELKKVDDFKI---------FLDLKFHDIPNT-----------ADACEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFSKRPLVLA-LTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVFESKKIKEHTSSNFLTLTPGIR-PFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIHRK................................................................................................................................................. 229
10 -5.880IDP01028 gene: pyrF; orotidine 5`-phosphate decarboxylase STM1707 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  10  8...................................................................................................SSCAITESPVVVALD--YHERDKALAFVDKIDPRDCRLKVGKEMFTLFGPQLVRDLQQRG------------VFLDLKFHDIPNT-----------ARAVAAAADLGVWMVNVHASGGARMMAAARDALAPFSKDAPLLIAVTVLTSMETSDGVTLSPAEHAERLARLTQQCGLDGVVCSAQEAVRFKQAFGAAFKLVTPGIR-PAGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKDINASLKRE................................................................................................................................................. 244

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Dunbrack RL Jr, Dunker K, Godzik A. Protein structure prediction in biology and medicine. Pac Symp Biocomput. 2000;(12):93-4.