current user: public
If you have questions about the server, please let us know.

Query: gi|7839146|ref|NP_058136.1| Putative protein of unknown function; YAL064C-A is not an essential gene; Yal064c-ap (YAL064C-A) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst MTGYFLPPQTSSYTFRFAKVDDSAILSVGGDVAFGCCAQEQPPITSTNFTINGIKPWQGRLPDNIAGTVYMYAGFYCPMKIVYSNAVSWHTLPVSVELPDVTTVSDDFAGHVYSFDDDLTAQLYYPLast
1 -25.000IDP92660 hypothetical protein CPE2277 [Clostridium perfringens str. 13] NP_563193 [Clostridium perfringens str. 13]  ali follow..  17  378.WGYIKPKKTGWYILGIL-SDDGAKGTITADGKAYEFSKNGFYPHGVQ-----------YFSNRDANPIYLSEDEYYPISLEYFNWGGGGAFKVGYKYSEYRDYGYKYGEPDY............. 477
2 -21.500IDP92589 LCCL domain-containing protein [Toxoplasma gondii ME49] TGME49_058400 [Toxoplasma gondii ME49]  ali follow..  3  141.DCGVRMFLGDEPIIIDPTPVSGDAISENPVPVIPTKEK-------------------TGMMRTESVMMELVGGQKYRIRVEVYLNPNSATIRLLWRHGEGGE-EVIPSSHYLTGNARPP...... 248
3 -7.740IDP91721 gene: MMRN2; multimerin-2 precursor [Homo sapiens] NP_079032 [Homo sapiens]  ali follow..  15  859.HGYFRAPERGVYLFAVSPGPGTGQLVFGGHHRTPVCTTGQG----------------SGSTATVFAMAELQKGERVWFELTQGS--------------KRSLSGTAFGGFLM............. 946
4 -7.310IDP04348 two component regulator [Clostridium perfringens ATCC 13124] CPF_2547 [Clostridium perfringens ATCC 13124]  ali follow..  10  363....WNAKKEGNYRITLWAKDESFIGDYEIESKLDYKIEKKVKKPIKITELIFDRDKTPLINEVIKLRVSAEGGTDLKYSFLIIKDGGNYQLDVRVKDKYSTKEYDVHTVLNFKVR.......... 495
5 -6.390IDP05612 putative lipoprotein [Bacillus anthracis str. Ames] BA_5233 [Bacillus anthracis str. Ames]  ali follow..  6  36........GSNSIDGKYKSFTGFATQDMDVKKGESWTFTFEDKTKQGTIKAYVLDSNDNVNSGNSKNNIKVSKDDTYKVKIITEEHGGEFEISWKKE............................. 128
6 -6.000IDP91360 16S rRNA uridine-516 pseudouridylate synthase [Vibrio vulnificus CMCP6] VV1_2843 [Vibrio vulnificus CMCP6]  ali follow..  9  105.TGLVLITDDGKWSHRITSCDKTYRVWLADPIGSDYAEKLAEGVQLRNEKELTLPAQMTIVNADENVLLTIHEGKYHQVKRMFAALGNKGAIELDESLEPGE........................ 219
7 -5.730IDP05411 putative chitin binding protein [Bacillus anthracis str. Ames] BA_2793 [Bacillus anthracis str. Ames]  ali follow..  6  277.........STEYSYTVKAIDAAGNASKESAKLTVKTTVEAHSMGTTTSSVDLMWSPSDDNIGVGHYDIYLLPNTTYKYVVKAVDVAGNES-IFTITTKTEG........................ 406
8 -5.710IDP91976 hypothetical protein HMPREF0837_10616 [Streptococcus pneumoniae TCH8431/19A] HMPREF0837_10616 [Streptococcus pneumoniae TCH8431/19A]  ali follow..  10  58.NGDFGQTEDGSSPWTGSKAQG----WSAWVDQKNSSADASTRVIEAKDGAITISS-PEKLRAAVHRMVPIEAKKKYKLRFKIKTDNKVGIAKVRII............................. 148
9 -5.650IDP05615 putative lipoprotein [Bacillus anthracis str. Ames] BA_5522 [Bacillus anthracis str. Ames]  ali follow..  10  93....YEVKEPGKYKVKAYAKDANK...................................................................................................... 112
10 -5.480IDP05036 hypothetical protein BA_1663 [Bacillus anthracis str. Ames] BA_1663 [Bacillus anthracis str. Ames]  ali follow..  5  152........LQGDWNLQLVQSYKENLVENEVKVPLIHINNEMPTLDKELPKLHKV-----TIDEMKGNVIERKQGDSIRVRVKATDVSAVKEVHVTLKGKENKEIT..................... 248
FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 5 6 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35