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current user: public |
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Query: gi|6319249|ref|NP_009332.1|(removed signalp:1-20) hypothetical protein; Pau8p (YAL068C) [Saccharomyces cerevisiae], from S.cerevisiae |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 | |||||||
# | Score | Template | Links and tools | %id | First | TTTLAQSDERVNLVELGVYVSDIRAHLAQYYMFQAAHPTETYPVEVAEAVFNYGDFTTMLTGIAPDQVTRMITGVPWYSSRLKPAISSALSKDGIYTIAN | Last |
1 | -7.570 | sp|Q9H3S5|PIGM_HUMAN GPI mannosyltransferase 1 OS=Homo sapiens GN=PIGM PE=1 SV=1 | ali follow.. | 22 | 265 | ....................RDIRHNFSPYLGIAAFLPQLILLSAVSFAYYRDLVFCCFLHTSIFVTFNKVCTSFLWYLCLL.................. | 343 |
2 | -6.680 | sp|Q6YHU6|THADA_HUMAN Thyroid adenoma-associated protein OS=Homo sapiens GN=THADA PE=1 SV=1 | ali | 6 | 239 | ...............VGRLLEYVYTHWEHPLDALRHQTKIMFKNLLQMHRLTVEGADFVPDPF-FVELTESLLRLEWH...................... | 300 |
3 | -6.140 | sp|Q5UE93|PI3R6_HUMAN Phosphoinositide 3-kinase regulatory subunit 6 OS=Homo sapiens GN=PIK3R6 PE=1 SV=1 | ali | 9 | 103 | DGEMLPGVSRLHTARVLVLGDDLGRLAQAYHRLRKRETQKFLSLQLYYIPVLAPEKPAASRQPELGELATFLGRVPWYQSNVNTLCPAIHKLAEMPPSLD | 210 |
4 | -5.920 | sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3 | ali | 11 | 45 | ALFAFEEIDGVDVCFFGMHVQEYGSDCPPYISYLDSIHHEILIGYLEYVKKLGYVTGHIWACPPSEGDDYIFHCHPWYKKMLDKAFAERI.......... | 165 |
5 | -5.860 | sp|P59093|CU099_HUMAN Uncharacterized protein C21orf99 OS=Homo sapiens GN=C21orf99 PE=2 SV=1 | ali follow.. | 16 | 4 | .........QMELISLNAFINNFWNINKRYLKILK--------------------------VIQKEHLKEHLTRLPWRKEHLT................. | 53 |
6 | -5.630 | sp|Q02040|AK17A_HUMAN A-kinase anchor protein 17A OS=Homo sapiens GN=AKAP17A PE=1 SV=2 | ali | 19 | 1 | .......................................................................LEGLPWFSEDVLVKVFEKFGE........ | 33 |
7 | -5.610 | sp|P48751|B3A3_HUMAN Anion exchange protein 3 OS=Homo sapiens GN=SLC4A3 PE=1 SV=2 | ali | 7 | 235 | ..................LVRDVRRRYPHYPS------------------LRDALHSQCVAAVLFIYFAALSPAIT-FGGLLGEKTEGLMGVSELIVSTA | 298 |
8 | -5.580 | sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2 | ali | 13 | 9 | ALFAFEEIDGVDLCFFGMHVQEYGSDCPPYISYLDSVHHEILIGYLEYVKKLGYTTGHIWACPPSEGDDYIFHCHPWYKKMLDKAVSERI.......... | 129 |
9 | -5.410 | sp|Q9UKL3|C8AP2_HUMAN CASP8-associated protein 2 OS=Homo sapiens GN=CASP8AP2 PE=1 SV=1 | ali | 18 | 1 | ...........................KNYMKFKAKFSLIQFHRIIESAIL---SFTSLIKHLNLHKISKSVTTL---QKNLCDIIESKLKQ........ | 59 |
10 | -5.390 | sp|Q96DN5|WDR67_HUMAN WD repeat-containing protein 67 OS=Homo sapiens GN=WDR67 PE=2 SV=2 | ali | 9 | 201 | AFPFVKLFQNNQLICFEVIATLIINWCQHWFEYFPNPPINILSMIENVLAFHD---KELLQHFIDHDITSQLYAWPLLETVFSEVL.............. | 283 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |