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Query: gi|6319259|ref|NP_009342.1| Protein of unknown function, localized in the nucleoplasm and the nucleolus, genetically interacts with MTR2 in 60S ribosomal protein subunit export; Ecm1p (YAL059W) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MWEQRRQKVVFSLTILVRYRLKQSMAKKISKNSRAARQSDALEPEVKDLSELPRAEKTDLTNILIRTAAKNEALLEAKISKKANKSKRGKKLNKKALEDKLDNSISSMDRDRLVKALNFTNRLDGKIAKSISRAKYIQNTRKAGWDSTNETIKKELAFLNGGLSVQAKSASEGNAEKEDEEIPEVFDSLAEDNTVQKTPTNRFGVLPDDVEELast
1 -7.760sp|O95886|DLGP3_HUMAN Disks large-associated protein 3 OS=Homo sapiens GN=DLGAP3 PE=1 SV=3  ali   10  121LLDQFEKQL-FHTLPYQRGPAGAGPGPAPGTGTAPEPRSESPS----RIRHLV----------SVQKLFAKSHSLEAPGKRDYNGPKAEGRGGSGGDSYPGPGSGGPHTSHHHHHHHHHHHHQSRHGKRSKSKDRKGDGRHQAKWDNLDSDS............................................................ 271
2 -7.740sp|O60551|NMT2_HUMAN Glycylpeptide N-tetradecanoyltransferase 2 OS=Homo sapiens GN=NMT2 PE=1 SV=1  ali follow..  1...............MAEDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQF--------WDT................................................................. 124
3 -7.450sp|Q7Z3V4|UBE3B_HUMAN Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UBE3B PE=1 SV=3  ali   10  3..........................................................................................TLSQTSRAWFIDRARQAREERLVQKERERAAVVIQAHVRSFLCRSRLQRDIRREIDDF................................................................ 60
4 -7.300sp|Q15878|CAC1E_HUMAN Voltage-dependent R-type calcium channel subunit alpha-1E OS=Homo sapiens GN=CACNA1E PE=1 SV=3  ali   35  27VWEQRTSQL----------------RKHMQMSSQEA................................................................................................................................................................................ 46
5 -7.270sp|Q8IXR5|F178B_HUMAN Protein FAM178B OS=Homo sapiens GN=FAM178B PE=2 SV=2  ali   10  33.WPGKLQELCCTLSWVSDHHHNLLA-PDMTSRSRRLRSQLSEKTQLSSLSRLLGLMRPSSLRQYLDSVPLPPCQEQQPKASAELDSCQDITPDQWGELQLLCMQLDRHISTQIRESPQAMHRTMLKATQTYIRWQLLTHCQPQAWKDI................................................................ 227
6 -7.260sp|Q12893|TM115_HUMAN(removed signalp:1-46) Transmembrane protein 115 OS=Homo sapiens GN=TMEM115 PE=1 SV=1  ali follow..  21  235..ERRRQLALKALNELKRVEDQSIWPSMDDDEEESGAKVDSPLPSDKA--PTPPGKGAAPESSLITFEAAPPTL.......................................................................................................................................... 305
7 -7.210sp|P31629|ZEP2_HUMAN Transcription factor HIVEP2 OS=Homo sapiens GN=HIVEP2 PE=1 SV=2  ali   11  20.WPQRSE-------TLSQLPAEKLPPKKKRLRLADMEHSSGESSTGTGLSRSPSQESNLSHSSSFSMSFEREETSKLSALPKQDEFGKHSEFLTVPAGSYSLSVPGHHHQKEMRRCSS---------QMPCPHPAEVPEVRSKSFD.................................................................. 152
8 -7.170sp|Q9NQA5|TRPV5_HUMAN Transient receptor potential cation channel subfamily V member 5 OS=Homo sapiens GN=TRPV5 PE=2 SV=2  ali   10  119........LMLNLFMMGDT-------WRVAQERDELWRAQVVATTVMLERKLPRCLWPRSGICGCEFGLGDRWFLRVENHNDQNPLRVLRYVEVFKNSDKEDDQEHPSEKQPSGAESGTLARASLALPTSSLSRTASQSSSHRGWEILRQNTLGHLNLGLNLSEGDGEE........................................... 275
9 -7.080sp|A1A4T8|CN182_HUMAN Uncharacterized protein C14orf182 OS=Homo sapiens GN=C14orf182 PE=2 SV=1  ali follow..  17.WRKRSSRTCV------RTQDAIHEPRGLSRSHTVLRHRHFVFLPLSSGAHPSVPPRDHFTHPFFASRVDGTVERGNPALWLCLSSPTGTRATKATKDPTLSSVQASQLEERPRGHQEAFEPAERAWEHNAERERIV........................................................................... 153
10 -7.070sp|Q16649|NFIL3_HUMAN Nuclear factor interleukin-3-regulated protein OS=Homo sapiens GN=NFIL3 PE=1 SV=2  ali follow..  23  77.WEKRR------------------KNNEAAKRSREKRRLNDLVLENKLIA----GEENATLKAELLSLKLKFGLISS....................................................................................................................................... 131

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35