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current user: public |
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Query: gi|33438755|ref|NP_878039.1| Putative protein of unknown function; identified by expression profiling and mass spectrometry; Yal063c-ap (YAL063C-A) [Saccharomyces cerevisiae], from S.cerevisiae |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . | |||||||
# | Score | Template | Links and tools | %id | First | MCPRTVLLIININHWFYDKNIVRIILTFRLDSGHISDICFINKNLANALITADISLLKRHDIRCTKYIITYYQRYRNKEKGKFISLCKNTIISSSV | Last |
1 | -5.270 | PB002776 gi|157737147|ref|YP_001489830.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]gi|157699001|gb|ABV67161.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018] | ali follow.. | 16 | 286 | ......NKLTKTKDWTYEKE-YRIVLNLKYDFNCLKGVIF-GIKTPQNKKDEIIEIIINKCHENNILDFEFYQAFYCKESKNI............. | 373 |
2 | -2.770 | HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399; | ali follow.. | 10 | 26 | ..PENII----------PDRMENILYDYHLSISMGNNL---SYSDNYQKEAYKNYVFEKHHITEAEF-MVWYTRHTEELASLYKKLGER....... | 102 |
3 | -2.770 | HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242; | ali follow.. | 14 | 215 | ..............................................................KCRDYGLIIIIGPEKNRIRRFFKICLS....... | 241 |
4 | -2.350 | HGC00933 gi|162753228|dbj|BAAZ01012194.1|2.0 TMP01261; | ali follow.. | 18 | 7 | ........................................IRNKLENDYLCPALR---------IQYFATSYSKSADHEGRAAIRMDGVEVLRSN. | 54 |
5 | -2.340 | PB012386 gi|82541244|ref|XP_724876.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi|23479680|gb|EAA16441.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii] | ali follow.. | 19 | 4 | .......................................YIFNDSTNIPIGTVFSFVSKYDYICNKAVQDISEDLIKIELNQNVSINKIFNILKA. | 59 |
6 | -2.320 | PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030; | ali follow.. | 13 | 16 | .................EIRTVGLMIALYEKRHPETDASYAIKRLERCHFGEDKPACKHCPIHC----------YQPARREAIKAIMR........ | 84 |
7 | -2.290 | PB036876 Q56VH6_BACFR/1-141 PB036876; Pfam-B_36876; | ali follow.. | 15 | 12 | ...............................QMYLEQRAAEDALFAKNYRNPAKNIDD-----CVTYILNYVQK...................... | 49 |
8 | -2.200 | PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242; | ali follow.. | 13 | 83 | ....................FVEPLTYFPILGSAAMYQAFMIGNISNKLVPAAIVAQSSIGAK------------AGSKRGDLAAIGGAATMHLLS | 149 |
9 | -1.990 | PB071107 _Gut.Meta.Jp.0066071_ gi|162701604|dbj|BAAY01026246.1||2 (+ 344:749~0 complete) | ali follow.. | 8 | 1 | ........................................MKRFASHFLFLPAYGYLKQYAVETEESVVRIFPLTEEIENVEWLP........... | 46 |
10 | -1.830 | PB000716 Q60CS7_METCA/1-294 PB000716; Pfam-B_716; | ali follow.. | 10 | 31 | ...RELQPLLGYSQWRRFEQAIERAITSCKESGNSPEHHF--AGAGKPITGGKGAVQVVDDYHLSRFA-CYLIAQNGDPRKPEIAQAQKYFAIQT. | 119 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35 |