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Query: gi|6319252|ref|NP_009335.1| Putative protein of unknown function; has homology to FLO1; possible pseudogene; (YAL065C) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNSATSETTTNTGAAETTTSTGAAETKTVVTSSISRFNHAETQTASATDVIGHSSSVVSVSETGNTKSLITSGLSTMSQQPRSTPASSIIGSSTASLEISTYVGIANGLLTNNGISVFISTVLLAIVWLast
1 -3.640HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870;  ali follow..  14  10..................................................................................................FLSVIAFLAGAGVSAGVFAFVL--VIGVV. 36
2 -3.560PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  16  7.............................................................................SWPPRRFPPVLLSGAVTLKRMPQPVTALLAAMITPAVLISGAGTLIMST.. 55
3 -3.230PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138;  ali follow..  9..............................QRKPRSFDHKPIYYDQRRDELEKRIERIRREVEQEEQAELDGQSSSHDYSGYRPRIRGTFVEGTQHLKERQLQGETQSTRSGRTLRTLALLIAVCLL. 105
4 -2.800HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  20  6............................................................................VSHQLKKLNNSSSLTKKNMTMEENTVHPARKLLLG---IAYLLQAVAVVVG. 55
5 -2.720PB001565 Q6LS01_PHOPR/1-384 PB001565; Pfam-B_1565;  ali follow..  21  309.......................................................SVASGGGTGRTAGPASYGMTDTMGRMHSDAQFAGSSSVPAHVEMMGLIGMGNNPMVGATVAVAVA........ 380
6 -2.570PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697;  ali follow..  1.................................................MIEVTDASLQKAAGEGMDEFIQVFTDKYKEVIGGELTAETMPLLTGEQHSLLAYQIFRDEVMFGGFCQLIQN....... 72
7 -2.390PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali follow..  15  228.....................................................................................................FNPTLSPFKVPFILSVFLLSIWLFLI. 253
8 -2.260HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;  ali follow..  14  24......................................................ATTAFAAGTGDVAGAVESTWSTASTQIKSVVDNVVFPAIDLILAVFFFAKLGSGQFEWAAPAILFACLVFTLLW 110
9 -2.020HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;  ali follow..  1....................................................................MAVSAPPILKTLKTKDMIAKTILQQIGGKRFTAMTGSRDFIDMGNGLRMSLAR....... 53
10 -1.960PB177066 Q891G9_CLOTE/1-159 PB177066; Pfam-B_177066;  ali follow..  19  32......................GRKTKNRRSIIVQKLGKKELIRQLDIAEANHCLSFEQVSEIIEYFNIQEGDFHTVESCKYNVPSVQAIGKVYHRLIISIISEQDNLVVFNSFISDEISDFNSSVYY 143

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 5 6 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35