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Query: gi|6319253|ref|NP_009336.1| Fungal-specific protein of unknown function; Yal064w-bp (YAL064W-B) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAGEAVSEHTPDSQEVTVTSVVCCLDSVVEIGHHVVYSVVTPLIVAVLIDTMAGEAVLEHTSDSQEEIVTTVVCSVVPLVCFVVSVVCFVISVVEIGHHVVYSVVAPLTVTVAVETIAEEMDSVHTLast
1 -4.050PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  10  1.....MKEKESKSIIVYCFGSYMNYMRRQ----YEIMGYRLPRAVTW------------------RALGYFAAVEAGLVAFRFLPPFKWIFGDMIDQVWLMYYGVIPLFLVWGADKYKTDGKSLF. 98
2 -3.710PB034883 _HOMD.0130261_ bfor_c_1_4664 Tannerella forsythia ATCC 43037 [1809083 - 1810348] ORF  ali follow..  14  2............RKELHNTKVTVRLRKSAYRNEWYLYIESYPVYTAGKSEPQRVREYLNRIVTTVV............................................................ 55
3 -3.440PB039305 _Gut.Meta.Jp.0057508_ gi|162726131|dbj|BAAY01002830.1||2 (- 1092:1581~0 complete)  ali follow..  14  10...........GEKTTTNKMTMTVMESSVRFSKGVTEALGCPAYVKLLVNDKQKKIAVQACDAXDEN........................................................... 65
4 -2.640HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;  ali follow..  58.................................................ALAGVKDIPRIEETYEGDELSDTLFVFAFFSDNRLNQALAALRKSGAGTFPYKAILTPTNQNWNALQCFSEIRREH. 133
5 -2.630HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;  ali follow..  29  53..................................VVDNVVFPLILAVFFFAKLGTAYFEYRKSGQFEWAAPAIL-------------------------LVFTLTAPMYL................ 109
6 -2.590PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  13  7...EQLIRRLSDASRLVPLALLAVVAAVIYV-HGLIYRVYSPSLLILVGTTVVAGIALVFWPRMGEDPLESAVTKWSILGTIVVAALVLSVAYSIPAGMAEERSLAQDATADAEAV--TDFPTVNE 132
7 -2.230PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;  ali follow..  83.................FVEPLTYFPILGSAAMYQAFMIGNISNKLVPAAIVAQSSIGAKAGSKRGDLAAVMAIGGAAT----MHLLSLLIFVGFLGTWLVSLVPVEV.................. 169
8 -2.210PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  21  5.................................................................................................FGYLFLDRPPYQVLASSAITYEEMLRLH. 32
9 -2.100PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818;  ali follow..  12  121.........................DLMMLMGNLMQWKFRMPAIFKKALRSMTEKTVHDVCTKTVWK---------------ADDVHKTAAAVRQYKERLGFSEQWMSEYVYNIVLLAKK...... 200
10 -2.100PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  11  6........................................................VPRDLTKVKSKVMFNL--TKRQLICFGMAVLIGVPSFFLMKTVMKTNTAVMGMMVIMMPFFF........ 65

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 7 9 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sikora S, Godzik A. Combination of multiple alignment analysis and surface mapping paves a way for a detailed pathway reconstruction--the case of VHL (von Hippel-Lindau) protein and angiogenesis regulatory pathway. Protein Sci. 2004 Mar;13(3):786-96. Epub 2004 Feb 06.