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Query: gi|6319254|ref|NP_009337.1| Protein of unknown function; may interact with ribosomes, based on co-purification experiments; (YAL064W) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRYTATFRPLQRFVMNPFASLEGQDNISSVFFLHMQQFESQVKDRFRFPIFRLERKTFGNSCYQVETLKVKCRPRHAKSCNLLTLLFKSRTQSVLVPNFGFLILNSEPLast
1 -4.900PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;  ali follow..  15  186..............LEALETLQDGDRVLISEACNHNRITSACNDIGMVQIPNKLEAALGGKKLQIEKLAIHCGGCMIDAQKMQQRMKDLHEAGVPVTNYGVFF..... 292
2 -3.490PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete)  ali follow..  15  113YVIEGSSKTLKYLKTSGPMDFEAQNAFSEDQLEIKISGSSDVKFPHNVKLRLGEFSVSGSGDLVFADLDCKNLTSKVSGSGDITLKGKADEARYSV............ 208
3 -3.120PB012472 gi|62259485|gb|AAX77857.1| unknown protein [synthetic construct]  ali follow..  20  4.......................................ENIIENLNIPTSRISKRIPKNSFETNTKLTSAEKKYLANDVKLITLEYSLVQQNIQVPAI......... 63
4 -2.370HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;  ali follow..  16  6.................................................FVKLSNLTIGYTLPIRNNKYMKSLRVYVSGNNLFCI....................... 41
5 -2.360HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920;  ali follow..  14  11.................CVNGVGNAASPVGAYASSTEWNYDNEVAYGF--YGLSYTTFTQEIQGQPEISVNIDSETGAPQAYATF-------NVKVTNTG........ 85
6 -2.210HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  27  1..............MTPYKQLKKLNNSSSLTKKNMTMEENTVHPARK............................................................. 36
7 -2.120HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;  ali follow..  17  21............CLMATTAFAAGTGDVAGAVESTWSTASTQIKDNVVFPAIDLILAVF---FAKLGTAYFEYRKSGQFEWAAPAILFACLVFTLTAPMYLWSIIG... 114
8 -2.080PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF  ali follow..  24  3.................VAKELRKKSIAE-YLLYMWQIEDIIR................................................................. 27
9 -1.980PB035451 Q3Z7G7_DEHE1/1-135 PB035451; Pfam-B_35451;  ali follow..  11  67.............ISRYVYTALQGGSIMKSWTNDDRMMIACCNDGTQPVIFKIERIDIPENEEEREWLEKQNFKNTVDDA............................ 133
10 -1.920PB048420 Q64S71_BACFR/1-165 PB048420; Pfam-B_48420;  ali follow..  25  2............................................EIQFVIVRSENAEY---CHNVNGTYVDVSD.................................. 29

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 2 6 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Multiple flexible structure alignment using partial order graphs. Bioinformatics. 2005 Mar 3;