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Query: gi|6319263|ref|NP_009346.1| Putative peroxisomal membrane protein required for import of peroxisomal proteins, functionally complements a Pichia pastoris pex22 mutation; Pex22p (YAL055W) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPPPSRSRINKTRTLGIVGTAIAVLVTSYYIYQKVTSAKEDNGARPPEGDSVKENKKARKSKCIIMSKSIQGLPIKWEEYAADEVVLLVPTSHTDGSMKQAIGDAFRKTKNEHKIIYCDSMDGLWSCVRRLGKFQCILNSRDFTSSGGSDAAVVPEDIGRFVKFVVDSDVEDVLIDTLCNLast
1 -4.740PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;  ali follow..  7  54...............................................................ELANVMIEEWATYDGDDFMENVKPNLKSTLCRMKDAGDFDKVTILKPYSFVLVDEDKET-----------AELLLIDDDTLLVDDELLKGLDKELDEFLKNLLE............. 147
2 -3.790PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  8  24.SKDGRKCPKWLLPLVAAVCAVILVVAGIIGWNAYSGAKLAEAKEACVTAADTVRNNANEYNALLNGDAADAAAVKAEQVKDSKTVESLGKELKASAPEYEGCVAENAQGLDAAAVKLNEQADYETHEKSLSKAVRAVVESKAAKRLDDAKTNLTAKLDE-ASKLLADSDGKVADN.... 198
3 -3.700HGC00672 gi|162843654|dbj|BABA01001055.1|4.0 TMP00845;  ali follow..  11  1MAHRLNTNKQFMVGNGILAFAVIFVV-VIFVYMSMRLQQQKAENRNFIET-TLTKGFAGDSTSIFINDSLLPFILEVKRFAEQSALMIVN---NATEKLSLFELSEQGGEYRFE--EGEEVKPTGAGIKKLSKE.............................................. 139
4 -3.180PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali follow..  14  18....GRDKFRTALCCSVVGMLLTLLFLSSCHYTRPDLTSEELSEKTKDSLNYLYDRHYTWNTNLEVTTDSVPIKDTYIALYKGDRVVVA----------------------EFAIHPADSVDSVWVKLAHTQEEQGWIRETEL------KESFVPTDISQAIHFFSD............. 158
5 -2.970PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  7  14...............................................EKVMENGMQKKVTEPYLVDALSFTEAEARIIEEMTPFIS-FTVSDIKRANYSELFPSDEESADRWFKCITLDEKSG-----EKKTSTQVLVQAADLRDAVKKLDEGMKGTMADY--QIGMVSETPLM...... 139
6 -2.870PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  13  67..............................VWPYAKLASERLSELNARLASIKSKSERRKYTKIVQKYIEEQFAAELKKLTRTEGQILV------------------------KLIHRQTGVTTFQLIKNLRDTTAGLFDIELKSEYNPVNNREDFLIEDILQRSFQ............. 187
7 -2.790HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  8  7.........................................................................................................................RGLFHVL-------LLICNREL-IGKRKDEDDMAKSTKTYEERIRALEKKEQ....... 52
8 -2.680HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178;  ali follow..  7  19................................TQLAQEQHKLKRLENRKKYLEKGERQKRTHRLCNLGGTIESLAP-KDLTRTEMTELMEYIFSLPEVQRAVRHMAITHINQASRGKEQKADGNIPLHRH.................................................. 117
9 -2.490PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  15  3.................................................................................................................KIISISGRPGLFEVHTQTRTGVVATSLVDGKRINANARNQVSSEINIYGLE................ 55
10 -2.360PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  28  5........................................................................................................................................................SVPRDLTKVKSKVM.............. 18
FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 2 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Jaroszewski L, Godzik A. Domain analysis of the tubulin cofactor system: a model for tubulin folding and dimerization. BMC Bioinformatics. 2003 Oct 10;4(1):46.