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Query: gi|6319278|ref|NP_009361.1| Cytochrome c heme lyase (holocytochrome c synthase), attaches heme to apo-cytochrome c (Cyc1p or Cyc7p) in the mitochondrial intermembrane space; human ortholog may have a role in microphthalmia with linear skin defects (MLS); Cyc3p (YAL039C) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGWFWADQKTTGKDIGGAAVSSMSGCPVMHESSSSSPPSSECPVMQGDNDRINPLNNMPELAASKQPGQKMDLPVDRTISSIPKSPDSNEFWEYPSPQQMYNAMVRKGKIGGSGEVAEDAVESMVQVHNFLNEGCWQEVLEWEKPHTDESHVQPKLLKFMGKPGVLSPRARWMHLCGLLFPSHFSQELPFDRHDWIVLRGERKAEQQPPTFKEVRYVLDFYGGPDDENGMPTFHVDVRPALDSLDNAKDRMTRFLDRMISGPSSSSSAPLast
1 -3.930PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  11  45...............................................................................GKAVTFENLQGTWMYVNPALQLNALKNVAGSLAATEAEKKEYCAKVGIVEGVFNYVFNSDSTFTSALKRGSLKGT--YSVSPEDKTVT-KLTVSTLTAHVVLSGNELTLLFNADKLLKFLSTVSSISSNTTLKAINKLASEYDG.............................................. 198
2 -3.670PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)  ali follow..  12  23.............................................................................RIGLYKQGLLHDMSKYSPTEFLVGCRYYKGYMSPNNAERADRGYSSAWLHHKGRNKHHLEY---WIDYAVSKPGDDKTHTKMEGMK---MPIRYVCEMF-----------------DRV-----SASKNYQKEKYTDKSALEYYE---KSVDHYMIHPDTKAMLEYLVMLSVKGEEYTYSYIKKEVLKGHIP 185
3 -2.990HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  7  18.......................AACDHNETYADQRDRELDS-------NAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDYIAKGKTQNVRAKICDDAITLTNDVPAWAAMTDEISVKNTSGTFEGYFVDIKKSLLANTYNSSYYGTVSATV-GWLIPFT----------GRLITADDELAHVRLLVPHTYGTTSASASVYCLYDIR............................... 233
4 -2.990PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  14  5................................................................................SVPKS------WRTPKRRKWRFTVWRRSWAATSKPPKSGETRKQPTIKNEFINEKRKMRMNLPKVKMLQVSKCLIGLAVMMLQSCDVADNLRDMLCGNWESVEGKPDVLIYKEGEAYKVTVFRRSGLRRKLKPETYLLQEENGNLFMNTGFRIDVSYNEATDVL......................... 170
5 -2.700HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;  ali follow..  10  75..............................GRGIGAVNSMIHHDEVYAISRDATPAPKKVSNVKDCSASDVTLQLSAASQSVPVG----------GSLDFTATIVHEGSGNYLVDGSDSGRVLTIT-----QETIYK---------SDVCPADSRLLLMAGDKDVQK--------------------------TWNTNAAKCTDESGWAKVNAGTYVAQLSLKDHPKVKSDPVTFTVQ............................... 240
6 -2.430PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;  ali follow..  10  25.....................................................................................................HSHKRRAAEAKGESLPEEPVRVVPPGCCGMHITCEKDSLLTAVSKSIVYYDDEELDRYAGVLPEEYNTEAVEE-----FEEILSTLQEEEVPSWIRSLQMRQIQMPISIKEQALFIVS.................................................. 137
7 -2.340PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  9  67............................................................................................VWPYAKLASERLSELNARLASIKSKSERRKYTKIVQKYIEEQFAAELKKLTR------TEGQILVKLIHRQTGVTTFQLIKNLRSFDIELKSEYNPVNNREDFLIED...................................................................... 180
8 -2.330HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304;  ali follow..  9  12........................................................................LERIRDIRA--------------SEKRVYRKVKEIFALSVDYDSKSQVAQSFFKLEYAATGHTAPELIAKRADASKDNMG---LTSFKGVHEEISTLNLIVNMYLDYAELQAKGHIPMHMADWVLENFGTVKREVAEKLALEQY--EQYDTHRRALEAADDVDELTADVKRLK........................ 199
9 -2.290HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;  ali follow..  16  46........................................................................................SSRWVYPEEEIKKLVESLEDKDKVYIKILTYEFEDEYVSFRIFSQGEWKVKLVTE.............................................................................................................................. 100
10 -2.230PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;  ali follow..  6  4.SLFWA---------------------IDIKNQFHHNWMGMSQINQTTSGNFYSHRNITDQVLENFTDALDCLTAHLMLECSEVLAGVKPANLISIVNRTRPCGRNLYLLWQQHHTDLAQRLNNLNFMVLQSRQQSLLLLCYDHVRLEHHLSHPGIRTLLGYKDDADCEGMLLELRSRIFPHEIGLFIGYPAKDWKIYGNPARSLALAEQYRCCRNKM................................................... 224
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Multiple flexible structure alignment using partial order graphs. Bioinformatics. 2005 Mar 3;