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Query: gi|6319256|ref|NP_009339.1| NADP(+)-dependent glutamate dehydrogenase, synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh1p; expression regulated by nitrogen and carbon sources; Gdh3p (YAL062W) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTSEPEFQQAYDEIVSSVEDSKIFEKFPQYKKVLPIVSVPERIIQFRVTWENDNGEQEVAQGYRVQFNSAKGPYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLDMGGGKGGLCVDLKGKSDNEIRRICYAFMRELSRHIGKDTDVPAGDIGVGGREIGYLFGAYRSYKNSWEGVLTGKGLNWGGSLIRPEATGFGLVYYTQAMIDYATNGKESFEGKRVTISGSGNVAQYAALKVIELGGIVVSLSDSKGCIISETGITSEQIHDIASAKIRFKSLEEIVDEYSTFSESKMKYVAGARPWTHVSNVDIALPCATQNEVSGDEAKALVASGVKFVAEGANMGSTPEAISVFETARSTATNAKDAVWFGPPKAANLGGVAVSGLEMAQNSQKVTWTAERVDQELKKIMINCFNDCIQAAQEYSTEKNTNTLPSLVKGANIASFVMVADAMLDQGDVFLast
1 -4.980sp|Q9P2H5|UBP35_HUMAN Ubiquitin carboxyl-terminal hydrolase 35 OS=Homo sapiens GN=USP35 PE=1 SV=3  ali   11  1.......................................................................................................................................................................................................................................................................................................................MDKILEAVVTSSYPVSVKQGLVRRVLEAARQPLEREQCLALLALGARLYVGGAE-----ELPRRVG-LLHVAGRHHPDVFAEFFSARRVLRLLQGGAGPPGPRALACVQL.................................... 106
2 -4.290sp|Q5T089|MORN1_HUMAN MORN repeat-containing protein 1 OS=Homo sapiens GN=MORN1 PE=2 SV=2  ali   22  21.........................................SPFSVNVQLLQDHGEIAKSESGRVLQISA------GVRYVQLSAYSEVNFFKVDRDNQETLIQTPFG............................................................................................................................................................................................................................................................................................................................................................. 81
3 -4.240sp|A7E2V4|K0913_HUMAN Zinc finger SWIM domain-containing protein KIAA0913 OS=Homo sapiens GN=KIAA0913 PE=1 SV=1  ali   14  8....................................................................................................................................................................................................................................................................................................................AVCLRAPVSESLSRLQRDQLQ-KFAQYLISELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPS---------ASDQSTWYLDESTLTDNIKKTLHK............................................... 99
4 -4.100sp|Q8IYV9|IZUM1_HUMAN Izumo sperm-egg fusion protein 1 OS=Homo sapiens GN=IZUMO1 PE=1 SV=2  ali   2.................................................................................................................................................................................................................................................................................................................VICDPSVVLALKSLEKDYLPGHLDAKHHKAMMERVENAVKDFQELSLNEDAYMGVVDEATLQ-----------GSWSLLKDLKRITDSDVKGDLFVKELFWMLHLQKETFATYVARFQKEAYCPNKCGVMLQTLI................. 126
5 -4.080sp|Q9C0F0|ASXL3_HUMAN Putative Polycomb group protein ASXL3 OS=Homo sapiens GN=ASXL3 PE=2 SV=3  ali   19  13...................................................................................................................................................................................................................................................................................................................CSTAISGAIKEH-----VSSVDKSSVLMSVDSANTTISACNISMLKTIQGTDTP---CIAIIPKCIEST................................................................................. 75
6 -3.960sp|Q6UXV1|IZUM2_HUMAN Izumo sperm-egg fusion protein 2 OS=Homo sapiens GN=IZUMO2 PE=1 SV=1  ali   13  2.................................................................................................................................................................................................................................................................................................................LQCDPLVLEALGHLRSALIPSRFQLEQLQARAGAVLMGMEGPFFRDYALNVFVGKVETNQLD-----------VASFVKNQTQHLMGNSLKDEPLLEELVTLRANVIKEFKKVLISYELKACNPKLCRLLKEEVL................. 126
7 -3.930sp|O15245|S22A1_HUMAN Solute carrier family 22 member 1 OS=Homo sapiens GN=SLC22A1 PE=1 SV=2  ali   10........................................................................PGVAELSQRCGWSPAEELNYT-----------VPGLGPAG-----EAFLGQCRRYEVDWNQSALSCVDPLASLATNRSHLPLGPCQDGWVYDTPGSSIVTEFNLVCA...................................................................................................................................................................................................................................................................................... 100
8 -3.660sp|Q9Y2G0|EFR3B_HUMAN Protein EFR3 homolog B OS=Homo sapiens GN=EFR3B PE=2 SV=2  ali   29......................................................................................................................................................................................................................................................................................................................IYLSCKEETNVQKHYEALYGLLALISIELANEEVVVDLIRLVLAVQDVAQVNEENLPVYNRCALYA--LGAAYLNLISQLTTVPAFCQHIHEVIETRKKEAPYMLPEDVFVER--PRLSQNLDGVVIELLFRQSKISEVLGGSGY.. 169
9 -3.620sp|Q9H7N4|SFR19_HUMAN Splicing factor, arginine/serine-rich 19 OS=Homo sapiens GN=SCAF1 PE=1 SV=3  ali   14  21....................................................................................................................................................................................................................................................................................................................LAIKPYYQKKDITKEEYKDILRKAVHKICHSKSGEINPVKVSNLVRA...................................................................................................... 67
10 -3.620sp|Q8TE67|ES8L3_HUMAN Epidermal growth factor receptor kinase substrate 8-like protein 3 OS=Homo sapiens GN=EPS8L3 PE=1 SV=2  ali   4GLTQAQYIDCFQKIKHSFNLLGRLATWLKETSAPELVH-------------------ILFKSLNFILARCPEAGLAAQVISPLLTPKAINLLQSCLSPPESNLWMGLGPA........................................................................................................................................................................................................................................................................................................................................................... 94

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 6 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.