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Query: gi|6319257|ref|NP_009340.1| Putative medium-chain alcohol dehydrogenase with similarity to BDH1; transcription induced by constitutively active PDR1 and PDR3; BDH2 is an essential gene; Bdh2p (YAL061W) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRALAYFGKGNIRFTNHLKEPHIVAPDELVIDIEWCGICGTDLHEYTDGPIFFPEDGHTHEISHNPLPQAMGHEMAGTVLEVGPGVKNLKVGDKVVVEPTGTCRDRYRWPLSPNVDKEWCAACKKGYYNICSYLGLCGAGVQSGGFAERVVMNESHCYKVPDFVPLDVAALIQPLAVCWHAIRVCEFKAGSTALIIGAGPIGLGTILALNAAGCKDIVVSEPAKVRRELAEKMGARVYDPTAHAAKESIDYLRSIADGGDGFDYTFDCSGLEVTLNAAIQCLTFRGTAVNLAMWGHHKIQFSPMDITLHERKYTGSMCYTHHDFEAVIEALEEGRIDIDRARHMITGRVNIEDGLDGAIMKLINEKESTIKIILTPNNHGELNREADNEKKEISELSSRKDQERLRESINEAKLRHTLast
1 -5.680sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3  ali   20  84.................................EACRFCGSRSGTELSAVGSVCSDADCQEYAKIACSKTHGHPCGGV------------------------KNEE------------HCLPCL----HGC.............................................................................................................................................................................................................................................................................................. 143
2 -5.000sp|Q9UPA5|BSN_HUMAN Protein bassoon OS=Homo sapiens GN=BSN PE=1 SV=4  ali   18  2...........................................................................................................................................................................VQPLVINLNAQEHTFLATATTVSITMASSVFM-------AQQKQPVVYGDPYQSRLDFGQGGGSPVCLAQVKQVEQ.......................................................................................................................................................................... 70
3 -4.140sp|O43593|HAIR_HUMAN Protein hairless OS=Homo sapiens GN=HR PE=1 SV=5  ali   11  6.............................................................................LLSGLGDRLCRLLRREREALAWAQREGQGPAVTEDSPGIPRCCSRCHHGLFNTCPRCSH......................................................................................................................................................................................................................................................................................... 67
4 -4.080sp|Q5T197|DCST1_HUMAN DC-STAMP domain-containing protein 1 OS=Homo sapiens GN=DCST1 PE=2 SV=1  ali   12  52....................................................................................................VVCQAPETPERTLDCEAVYCWSCWDDMRQRC.............................................................................................................................................................................................................................................................................................. 86
5 -3.940sp|Q9Y236|OSGI2_HUMAN Oxidative stress-induced growth inhibitor 2 OS=Homo sapiens GN=OSGIN2 PE=2 SV=1  ali   16  19................................................................................................................................................................................................VVIIGNGPSGICLSYMLEAIHPNTILNSKLEEARHLSIVDQDLEYLSEGLEGRSSNPVAVLFDTLLHPDADFGYDYPSV.................................................................................................................................................. 106
6 -3.880sp|Q9NZQ8|TRPM5_HUMAN Transient receptor potential cation channel subfamily M member 5 OS=Homo sapiens GN=TRPM5 PE=1 SV=1  ali   7  4..............................................................................................................................................DSNLSHFILVEPGPPGKGDGLTELR-LRLEKHISEQRAGYGGTGSIEIPVLCLLVNGDPNTLERISRAVEQAAPWLILV--------GSGGIADVLAALVNQPHLLVPKVAEKQFKEKFPSKHFSWEDIVRWTKLLQNITSHQHLLTVYDFEQEGSEELD-TVILKALVKACKSHSQEPQDYLDELKLVAWDRVDIAKSEIFNGDVEWKSCDLEEVMDALVSNKPEFVRLFVD.......................................... 228
7 -3.750tr|Q5TYM6|Q5TYM6_HUMAN Family with sequence similarity 72, member A OS=Homo sapiens GN=FAM72A PE=4 SV=1  ali   12  31VSQDGVPGCTVMGGETRSPENAVDFTGKCKLKDIACLKCGNIVGYHV-----------IVPCSSCLLSCNNGHFWMFHSQAVYDINRLDSTGVNVLLWGNLPEIEESTDEDVLNISAEEC--IR..................................................................................................................................................................................................................................................................................................... 149
8 -3.690sp|Q96DY7|MTBP_HUMAN Mdm2-binding protein OS=Homo sapiens GN=MTBP PE=1 SV=1  ali   9  7.........................................................................................................................................................AENLHQLSDKLPAPGRAMVD---IILLLSDKDPPKLKDYLPTVGA------LKHLREWYSAKTIAGNHCEINCQKIAEYLSANVVSL------EDLRNVIDSKELWRGKIQIWERKFGFEISFPEFCLKGVTLKNFSTSNLNTDFLAKKIIPSKDKNILPKVFHYYG-----PALEFVQMIKLSDLPSCYMSDIEFELTKQNSVLLLEQISSLCSKVGALFV.......................................... 214
9 -3.620sp|Q9H665|IGFR1_HUMAN IGF-like family receptor 1 OS=Homo sapiens GN=IGFLR1 PE=1 SV=1  ali   20  4......................................CGRLEYWNPDNKCCSSCLQRFGP------PPCPDYEFR---ENCGLN----DHGDFVT-PPFRKCSSGQCNPDGAE----LCSPC...................................................................................................................................................................................................................................................................................................... 70
10 -3.570tr|C9J3Y5|C9J3Y5_HUMAN Uncharacterized protein OS=Homo sapiens GN=FAM72D PE=4 SV=1  ali   10  31VSQDRVPGCTVMGGETRSPENAVDFTGKCKLKDIACLKCGNIVGYHVIVPCSSCLLSCNN-----------RHFWMFHSQAVYDINRLDSTGVNVLLRGNLPEIEESTDEDVLNISAEEC--IR..................................................................................................................................................................................................................................................................................................... 149
FFAS is supported by the NIH grant R01-GM087218-01
1 4 4 8 1 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rodrigues AP, Grant BJ, Godzik A, Friedberg I. The 2006 automated function prediction meeting. BMC Bioinformatics. 2007 May 22;8 Suppl 4:S1-4.