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Query: gi|33438755|ref|NP_878039.1| Putative protein of unknown function; identified by expression profiling and mass spectrometry; Yal063c-ap (YAL063C-A) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MCPRTVLLIININHWFYDKNIVRIILTFRLDSGHISDICFINKNLANALITADISLLKRHDIRCTKYIITYYQRYRNKEKGKFISLCKNTIISSSVLast
1 -6.790PF13798.6; X2GN24_9BACI/8-168; Protein of unknown function with PCYCGC motif  ali follow..  25  88..............................SVGHKSNLCFIQEKKQDGTIVWD-----DHGTRCAVCLEIALQSAKMHKDGMTLKEIRQTIDET.. 147
2 -6.300PF15553.6; F6TUT0_MACMU/1-159; Testis-expressed protein 19  ali follow..  12  1MCP------VSVRYEEEGMSYLYASWMYQLQHGDQLSICFTCFKAAFLDLKDLLESEDWEEDNWDPELMEHTEAESEQEGSS.............. 77
3 -6.280PF08715.10; R1AB_IBVB/1174-1482; Papain like viral protease  ali follow..  16  79.........................LAQKWNVQYRDNFLILEWRDGNCWISSAIVLLQAAKIRFKGFLTEAWAKLLGGDPTDFVAWC......... 140
4 -6.210PF09719.10; R6NMM3_9CLOT/15-143; Putative redox-active protein (C_GCAxxG_C_C)  ali follow..  14  3.CAQAVFCAFSDELGFDKDTALRISAGFGGGIGRLREVC-----VSGMTMTLSYKF-DPNDRQRKAALYALIQRAAGEFKAETGSIVCRELLGLGG 96
5 -5.870PF14834.6; A6TBY7_KLEP7/95-211; Glutathione S-transferase, C-terminal domain  ali follow..  11  46..................QSAEKLFATATMLLAHGGQNLFGEWSIADADLALMLNRLVLNGDKVPEALADYASFQWQRA................. 106
6 -5.830PF13893.6; A1ZBN3_DROME/148-270; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)  ali follow..  10  21..QGAVMMVYGLDHDTSNTDKLFNLVC---LYGNVARIKFLKTKEGTAMVQMGVQHLNNIPVGTGGKIQIAFSKQNFLSEVI.............. 105
7 -5.790PF14389.6; D7U6I3_VITVI/79-162; Leucine-zipper of ternary complex factor MIP1  ali follow..  14  13........ILQLEKRLQGQFAVRCALEKALGYRSSSHDTTVEISMPKPALIKEIAVLELEVVHLEQYLLSLYRKAFDQ.................. 84
8 -5.780PF04294.13; R5TXH4_9CLOT/243-375; VanW like protein  ali follow..  18  44.......................AYRNGVLIEEPGGGVCQVSTTLYNAIVSSGLTATERHS................................... 81
9 -5.760PF01265.17; E4V2Y5_ARTGP/1-312; Cytochrome c/c1 heme lyase  ali follow..  12  220........................LARFMGRPQELTPKAQFFQLMGRVYPSK----FDRHD-KEIRYVIDYYSGPPEPTGEPVFFLDIRPAVDT.. 301
10 -5.580PF14576.6; B9GIM3_POPTR/32-317; Sieve element occlusion N-terminus  ali follow..  16  94...TTVSLFNMLTSYSWDAKLVLTLAAFALNYG---EFWLLAQIYSSNDLAKSMAILRQ..................................... 146

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 8 0 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Jaroszewski L, Bierzynski A, Godzik A. Multiple model approach--dealing with alignment ambiguities in protein modeling. Pac Symp Biocomput. 1997;:328-39.