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Query: gi|6319253|ref|NP_009336.1| Fungal-specific protein of unknown function; Yal064w-bp (YAL064W-B) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAGEAVSEHTPDSQEVTVTSVVCCLDSVVEIGHHVVYSVVTPLIVAVLIDTMAGEAVLEHTSDSQEEIVTTVVCSVVPLVCFVVSVVCFVISVVEIGHHVVYSVVAPLTVTVAVETIAEEMDSVHTLast
1 -7.580PF17608.2; Q74KI2_LACJO/1-124; Family of unknown function (DUF5504 topsan)  ali follow..  35  14............SWVITITGLIIFIGNVHEYGLHFTYNQVLAIIIVILL------------------LVTTMYFSVTP................................................ 61
2 -5.700PF17204.3; G0N0U7_CAEBE/17-92; Sid-5 family  ali follow..  16  1....................................................AAKTCADNLKTAEDNCVYLLAISIFLLVLNVLSIVFFNRHSLIKFYRARFHPLPSSETASSVFRGAFDHDAF.. 72
3 -5.530PF06917.12; Q6D5A5_PECAS/13-568; Periplasmic pectate lyase  ali follow..  12  1.....VALQASATTPDRLTIVNQYVDNVLAKAGDHYHGQSPTPLLADGVDPRTGKQMAVLSNFSAQQNLMRVLVGLSNLS-YHFQHYQDESGLLIWGGHRFVDLKT.................... 123
4 -5.500PF03413.19; Q81MX8_BACAN/145-217; Peptidase propeptide and YPEB domain  ali follow..  27  23.............EEPEIKQVVYVDEN-ATNAYQITFSASTPEYVTVLIDAFVGDLLKEL.................................................................. 73
5 -5.470PF14613.6; G1WYX0_ARTOA/644-804; Protein of unknown function (DUF4449 topsan)  ali follow..  20  1...................................................................................VDVKHVNIKLKQSKHKMLFTVFKPLLLKVVRPALQKVLEK... 40
6 -5.440PF17367.2; D3E401_METRM/2-99; NiFe-hydrogenase-type-3 Eha complex subunit A  ali follow..  18  2..........................SIGANGFQLLINYIVAIVVAVII-------ALRLPLLPERPIRFSWTTSALPIFAIGILAIFYSLNVYWIYDGLILSVIVGLASALFVK........... 88
7 -5.440PF01250.17; RS6_SYMTH/3-92; Ribosomal protein S6  ali follow..  17  3...........................................EMMVIARPDLDEAGLQALSDKIAELITSNGGTVESQDAWKKQRLAYEIKHLREGFYSVFNFTGEPRTANELNRVLKITDEV.. 83
8 -5.330PF03287.14; VH21_RFVKA/1-146; Poxvirus C7/F8A protein  ali follow..  12  3..............................IQHKLDVFIVSENIAIKDANLLNGDCTIKLKLNTKKSVRFVVLLEIKPMYMKLNGVSVDLKLDYKDAIKRIYSVDLVLYSDSVIHLFSDTDERY.. 105
9 -5.280PF02478.16; PHOSP_HMPVC/4-284; Pneumovirus phosphoprotein  ali follow..  13  160...........EERDTSSLSIEARLESIEE---SMILGLLRTLNIATAGPTAARDGIRDAMIGIREELIADIIKEAKGKAAEMMEEEMNQRTKIGNGSVKLTEKAKELNKIVEDESTSGESEE... 270
10 -5.220PF06143.11; Q8V5R0_9ABAC/1-88; Baculovirus 11 kDa family  ali follow..  29  8............................................VAVFADNTVPASILDY--DQVNQVVTRNRTFLRDFVLVIASLVIFVMIVTFIA--LIYSIQKSLELQVARK........... 74

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 7 9 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sikora S, Godzik A. Combination of multiple alignment analysis and surface mapping paves a way for a detailed pathway reconstruction--the case of VHL (von Hippel-Lindau) protein and angiogenesis regulatory pathway. Protein Sci. 2004 Mar;13(3):786-96. Epub 2004 Feb 06.