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Query: gi|6319263|ref|NP_009346.1| Putative peroxisomal membrane protein required for import of peroxisomal proteins, functionally complements a Pichia pastoris pex22 mutation; Pex22p (YAL055W) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPPPSRSRINKTRTLGIVGTAIAVLVTSYYIYQKVTSAKEDNGARPPEGDSVKENKKARKSKCIIMSKSIQGLPIKWEEYAADEVVLLVPTSHTDGSMKQAIGDAFRKTKNEHKIIYCDSMDGLWSCVRRLGKFQCILNSRDFTSSGGSDAAVVPEDIGRFVKFVVDSDVEDVLIDTLCNLast
1 -55.300PF12827.7; C4Y073_CLAL4/43-162; Peroxisomal biogenesis protein family  ali follow..  22  2..................................................KKIKSKYANKSVTLTLSHSVLNSDSSLEEILSNNVTFILPPYLSVDDLQCNISVVPEILQDNYKLLKCSNMQGYFQLLKNLRPDILIVCTDDLGIT-----EQIPKDLGRFVGKVVT............. 120
2 -6.910PF09813.9; B0JZX9_XENTR/1-100; Coiled-coil domain-containing protein 56  ali follow..  12  42....RKNAGKLRGRNLVTGLVIGGIVLGIYGYTFYSVSQEKFLDELEVEAKAARASYPKTS....................................................................................................................... 98
3 -6.710PF13712.6; R6LUX7_9CLOT/8-218; Glycosyltransferase like family  ali follow..  1...................................................................................CFVICYNNQNYLSECLLYIRNLNIPDGYTIDILQIEDASSMAEGMDATDARYIVYLHQDVFILEKDFIKKTIKIFES.................... 81
4 -6.300PF15021.6; E2R8L7_CANLF/1-204; Protein of unknown function (DUF4521 topsan)  ali follow..  10  120........................................................................................................TSVCQCLSQKINELKGQESQKYALRSFQMARVVFSRDSVLLEDEKPTPGLSKDIIHFLLQ................ 199
5 -6.300PF17073.5; SAFA_SHIDS/1-65; Two-component-system connector protein  ali follow..  21  7...............................................................................................................KNKITQRDNYKGIMSVI--LLTLTLIAIFSAIDQLGISEMGRIARDLTHFI.................. 59
6 -6.120PF03071.15; K4B485_SOLLC/16-444; GNT-I family  ali follow..  64................................QECRQLRALVQDLESKGIKKLIGNVQMPVAAVVVLEKTIKSILKYQTSVASKYPLFISQDGSNPDVRKLALSERPGELVAYYKIARHYKWALDQLFHKHNFSRVIILEDDM---------EIAADFFDYFEAGATLLDRDKSIMAISS 227
7 -6.070PF12868.7; B8NBW3_ASPFN/561-699; Domain of unknwon function (DUF3824 topsan)  ali follow..  11  1........KHRSRSRDLAEAALAATGVGYAAHKYTQRRERKKAEQERERPRFDEDARQDSY....................................................................................................................... 53
8 -5.960PF18492.1; A0A081NI44_9GAMM/44-170; Open reading frame 2 N-terminal domain  ali follow..  14.......................................VVNAPAVRAASFASATAAAPAKPSVTKGMTLTSSLTGQPVKVTGRFTVLLDKGVDASEFATRHGLSLYKGSSRLAIFEAAESVDLLALDAQLREASEL........................................... 113
9 -5.860PF14937.6; H2U5X6_TAKRU/16-97; Domain of unknown function (DUF4500 topsan)  ali follow..  30.........RPNKPVMAFGLVAITLCVGYLGYMHAMKENDQQLYEAIDSDGERYTRRKTSK....................................................................................................................... 81
10 -5.810PF00625.21; KGUA_ECOLI/4-186; Guanylate kinase  ali follow..  81................................................TSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAE------MSHYAEYDYLIVNDDFDTALTDLKTIIRAE....................... 183

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 5 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Clustering of highly homologous sequences to reduce the size of large protein databases. Bioinformatics. 2001 Mar;17(3):282-3.