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Query: gi|6319249|ref|NP_009332.1|(removed signalp:1-20) hypothetical protein; Pau8p (YAL068C) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst TTTLAQSDERVNLVELGVYVSDIRAHLAQYYMFQAAHPTETYPVEVAEAVFNYGDFTTMLTGIAPDQVTRMITGVPWYSSRLKPAISSALSKDGIYTIANLast
1 -8.620d2bgga2 c.44.3.1 (A:11-170) Hypothetical protein AF1318 {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  10  87.KSQVDNAIDTGVDGIMLVLPEYNTPL--YYKLKSYLINSIPSQFMRYDILSNRNLTFYVDNLLV-QFVSKLGGKPW....................... 159
2 -8.620d2jk1a_ c.23.1.0 (A:) automated matches {Rhodobacter capsulatus [TaxId: 1061]}  ali model 3D-neighbors follow..  12  29AQGAEAAIAILEEEWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYTDS-ASMMAAINDAGIHQFLTK-PWHPEQLLSSARNAAR......... 117
3 -8.590d2rjna_ c.23.1.0 (A:) automated matches {Neptuniibacter caesariensis [TaxId: 207954]}  ali model 3D-neighbors follow..  15  34FTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQV-AKSYPDIERVVISGYADAQATIDAVNRGKISRFLLK-PWEDEDVFKVVEKGLQ......... 122
4 -8.340d3hv2a_ c.23.1.0 (A:) automated matches {Pseudomonas fluorescens [TaxId: 220664]}  ali model 3D-neighbors follow..  16  39ARDATQALQLLASREVDLVISAAHLPQMDGPTLLARI-HQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSK-PWDDQELLLALRQALE......... 127
5 -6.830d3kcna1 c.23.1.0 (A:6-139) automated matches {Rhodopirellula baltica [TaxId: 265606]}  ali model 3D-neighbors follow..  21  46...............FSVIMVDMRMPGMEGTEVIQKA-RLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLNK-PCQMSDIKAAINAGIK......... 119
6 -6.510d1yvua3 c.44.3.1 (A:315-487) Argonaute homologue Aq_1447 {Aquifex aeolicus [TaxId: 63363]}  ali model 3D-neighbors follow..  9  91EKLIPVINKIKDVDLVIVFLEE-YKSFLLYDFVKRELKKMIPSQVILNRTLKNENLKFVLLNVAE-QVLAKTGNIPY....................... 172
7 -5.710d1zh5a1 a.4.5.46 (A:5-103) Lupus La autoantigen N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  8  7....................AALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISED..... 81
8 -5.420d4acfa1 d.15.9.0 (A:4-104) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}  ali model 3D-neighbors follow..  6  3PDDVFKLAKDEKVEYVDVRFCDLPGIMQHFTIPASAFDKSVFDDGLAFDGSSIRGFQSI-SDMLLLPDPETARIDPFRAAKTLNINFFVHDPFT...... 97
9 -5.280d3hlxa1 a.132.1.4 (A:2-251) Coenzyme PQQ synthesis protein C, PqqC {Klebsiella pneumoniae [TaxId: 272620]}  ali model 3D-neighbors follow..  9  168........KEEGYFFFRSRLSQANRDVEHGLALAKAY-NRMLEILQFKLDILWSMLDAMTMAYALQRYHTVTDKAAWHTTRL.................. 249
10 -5.190d3rqza1 d.159.1.0 (A:1-243) automated matches {Sphaerobacter thermophilus [TaxId: 479434]}  ali model 3D-neighbors follow..  13  4.................LIISDVHANLVALEAVLSDRPRECVELVRVLISVIGNHDWACIGRLSLDEFNPVAFASYWTTMQLQAEHLQYLES........ 100
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.