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Query: gi|6319252|ref|NP_009335.1| Putative protein of unknown function; has homology to FLO1; possible pseudogene; (YAL065C) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNSATSETTTNTGAAETTTSTGAAETKTVVTSSISRFNHAETQTASATDVIGHSSSVVSVSETGNTKSLITSGLSTMSQQPRSTPASSIIGSSTASLEISTYVGIANGLLTNNGISVFISTVLLAIVWLast
1 -6.530[T] KOG3797 Peripheral-type benzodiazepine receptor and related proteins  ali follow..  22  43..............................................................................KQPKFHPPASAFGPAWTLLYLT--MGYASHLAYKADSILYIAQLAANFAW 101
2 -6.180[J] COG0048 Ribosomal protein S12  ali follow..  15  18.....................................................KSKSPALENCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGEGHNLQEHSVVLI........... 82
3 -6.040[T] COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)  ali follow..  10  33..............................................................................QRPDWLTFEFIIPFVWTFIWAC--TTISAIIVWEKRMAIYAAIAISTSAY 90
4 -5.820[P] COG0748 Putative heme iron utilization protein  ali follow..  18  22..................................................................NACQTIQLATVNEKPNASYAPFAYHNDCYVVLISEMARHARNLQQVPKVSLMLIE....... 78
5 -5.720[S] COG2119 Predicted membrane protein  ali follow..  15  21....................................................................AISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVADYL. 79
6 -5.420[M] COG1292 Choline-glycine betaine transporter  ali follow..  23  207...........................................................ATTLGIGVVQLNYGLSVLFDIPDSMAAKALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFV. 275
7 -5.410[R] COG3269 Predicted RNA-binding protein, contains TRAM domain  ali follow..  14  7.................................................................................DERTSVPVEEGKTYDVTIQDIARQGDGIARIEGFVVFVPNTS..... 48
8 -5.340[J] KOG1750 Mitochondrial/chloroplast ribosomal protein S12  ali follow..  14  46.....................................................ISTAPQLDQCPQRKGVVLRVMVLKPKKPNSAQRKACRVRLTNGNVVSAYIGEGHDAQEHSIVYV........... 110
9 -5.140[R] KOG3807 Predicted membrane protein ST7 (tumor suppressor in humans)  ali follow..  17  1............................................................................MADRGGVGEAAAVGASPASVPGLNPTLGWRERLLAGTGASLWFVAGLGLLY. 54
10 -5.030[TZ] KOG4203 Armadillo/beta-Catenin/plakoglobin  ali follow..  11  523....ELNSKIPNRIAPSGSQHNLALPIENGNGSVLSFSASASQLVRESPLMEEVVLVARMHQMDTLSNLLREYVGEKTRIERLDSSRT-LESSTVPILLGLAIG---------CVGIFAYSRL..... 642
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang B, Jaroszewski L, Rychlewski L, Godzik A. Similarities and differences between nonhomologous proteins with similar folds: evaluation of threading strategies. Fold Des. 1997;2(5):307-17.