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Query: gi|6319254|ref|NP_009337.1| Protein of unknown function; may interact with ribosomes, based on co-purification experiments; (YAL064W) [Saccharomyces cerevisiae], from S.cerevisiae

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRYTATFRPLQRFVMNPFASLEGQDNISSVFFLHMQQFESQVKDRFRFPIFRLERKTFGNSCYQVETLKVKCRPRHAKSCNLLTLLFKSRTQSVLVPNFGFLILNSEPLast
1 -5.570[S] KOG4487 Uncharacterized conserved protein  ali follow..  21  70.................FGSLQIDGERATLFVGKKQRLLGKVT-KLDVPMGIMHFNSKDNKVELVDVMKYK-------------VIFKDRPLPIM............. 133
2 -5.230[S] KOG4852 Uncharacterized conserved protein  ali follow..  19  4................................................PLIRVSRKRTADP---HDALILHTKRAKHGGNPLVFTLYKAAGND............... 45
3 -5.170[M] COG1346 Putative effector of murein hydrolase  ali follow..  19  124.........LPKSVTTPIASIGGIPAISAVCVI--AVFGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPIILA... 228
4 -4.920[R] COG2346 Truncated hemoglobins  ali follow..  10  36.........VRALTRRFYELMDTLPEAARCRAIHPADLSGSEAKFYDY----LTGYLGGPPVYVEKHGHPMLRRRHFV.............................. 100
5 -4.830[KE] COG3060 Transcriptional regulator of met regulon  ali follow..  25  3.....................EWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNL------RHATNSELLCEAFLHAFTGQPLPD.......... 73
6 -4.740[S] COG4873 Uncharacterized protein conserved in bacteria  ali follow..  20  19.HFCYFFGTQQKF---PFLSI---DENQYIIFIATEQFIREIKLLIALLLNENTAKYFQKALLCLKERKLVKIAKVGNVIGLTGVVEKVNENSVIV............ 112
7 -4.710[P] COG4107 ABC-type phosphonate transport system, ATPase component  ali follow..  15  179...GGLDVSVQARLLDLLRSLVRNFHLSVIIVTHDIGVVRLLAHRLLV-------MQQGQVVESGLTDQVLDDPQHPYTQLLVSAA...................... 254
8 -4.700[V] COG4167 ABC-type antimicrobial peptide transport system, ATPase component  ali follow..  14  179...ASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLV-------MHQGEVVERGSTADVLASPLHELTKRLIAGH...................... 254
9 -4.610[O] KOG0421 Ubiquitin-protein ligase  ali follow..  20  60........PEEDNIFCWKGTITGSKDTGTEYRLSLT---KSPKVKFETCCFHPNVDLYGNIC--LDILQDKWSSAYDVRTILLSLLGEPNISSPLNNQAAQLWSNQE. 166
10 -4.580[G] COG4677 Pectin methylesterase  ali follow..  12  229.PAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNI-----YYGFLAVNSR. 332
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang B, Jaroszewski L, Rychlewski L, Godzik A. Similarities and differences between nonhomologous proteins with similar folds: evaluation of threading strategies. Fold Des. 1997;2(5):307-17.