current user: public |
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Query: gi|16758994|ref|NP_454611.1| thr operon leader peptide (STY0001) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi |
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# | Score | Template | Links and tools | %id | First | MNRISTTTITTITITTGNGAG | Last |
1 | -2.280 | [T] KOG2417 Predicted G-protein coupled receptor | ali follow.. | 30 | 151 | ISRVGVVGVTIMAILSGFGA. | 170 |
2 | -1.890 | [N] COG5567 Predicted small periplasmic lipoprotein | ali follow.. | 23 | 1 | MKNVFKTLAVLLTLFSLTGCG | 21 |
3 | -1.790 | [J] COG0858 Ribosome-binding factor A | ali follow.. | 23 | 31 | ..RVGMATVSGIELS...... | 43 |
4 | -1.770 | [S] COG4185 Uncharacterized protein conserved in bacteria | ali follow.. | 28 | 3 | IVRLKKLEQPVFLIVAGNGSG | 24 |
5 | -1.730 | [I] COG0825 Acetyl-CoA carboxylase alpha subunit | ali follow.. | 19 | 185 | LREMSRLNVPVICTVIGEGGS | 205 |
6 | -1.690 | [R] KOG4431 Uncharacterized protein, induced by hypoxia | ali follow.. | 20 | 63 | ..RVAAQGTVVGCLTAG.... | 77 |
7 | -1.670 | [V] KOG4788 Members of chemokine-like factor super family and related proteins | ali follow.. | 56 | 4 | .....TVTRTTITTTTTSSSG | 19 |
8 | -1.660 | [S] KOG4618 Uncharacterized conserved protein | ali follow.. | 43 | 8 | ..RRQTSSLSTITMTNDN... | 27 |
9 | -1.540 | [N] COG1582 Uncharacterized protein, possibly involved in motility | ali follow.. | 33 | 19 | IEQIEAFPDTTITLINGK... | 36 |
10 | -1.530 | [L] COG1332 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) | ali follow.. | 18 | 2 | ..KCKIELLSPLHIGNGN... | 17 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Rychlewski L, Zhang B, Godzik A. Fold predictions for bacterial genomes. J Struct Biol. 2001 May-Jun;134(2-3):219-31. Review. |