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Query: gi|16758994|ref|NP_454611.1| thr operon leader peptide (STY0001) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20
# Score Template Links and tools%idFirst MNRISTTTITTITITTGNGAGLast
1 -3.590IDP91738 Q5YB85_STRSG [Streptococcus sp. `group G`]  ali follow..  25  1.RKLKKGTASVAVALTVLGAG 20
2 -2.480IDP92694 TpgX protein [Staphylococcus aureus subsp. aureus ST398] YP_005735174 [Staphylococcus aureus subsp. aureus ST398]  ali follow..  15  1MKKLVTGLLALSLFLAACG.. 19
3 -2.400IDP91932 pneumococcal histidine triad protein E [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007089 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  10  1MLEITLKSPYQFAHILFQS.. 19
4 -2.330IDP06198 hypothetical protein HP0767 [Helicobacter pylori 26695] NP_207560 [Helicobacter pylori 26695]  ali follow..  19  1MEKVLAFFSPSFFISSFSGGG 21
5 -2.110IDP00754 gene: spa; immunoglobulin G binding protein A precursor SACOL0095 [Staphylococcus aureus subsp. aureus COL]  ali follow..  11  1MKKKNIYSIRKLGVGIAS... 18
6 -1.830IDP04171 acetyl-CoA carboxylase carboxyltransferase subunit alpha [Vibrio cholerae O1 biovar eltor str. N16961] VC2244 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  19  185LKVMSGLKVPVICNVVGEGGS 205
7 -1.800IDP04621 acetyl-CoA carboxylase carboxyltransferase subunit alpha [Bacillus anthracis str. Sterne] BAS4494 [Bacillus anthracis str. Sterne]  ali follow..  23  180LFEMAGLTVPVICIVIGEGGS 200
8 -1.730IDP00116 gene: accA; acetylCoA carboxylase, carboxytransferase component, alpha subunit (gi 16763622) NT01ST0285 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  19  185LREMSRLNVPVICTVIGEGGS 205
9 -1.640IDP00023 gene: papR; PapR BA_5594 [Bacillus anthracis str. Ames]  ali follow..  19  1MKKLLIGSLLTLAMAWGISLG 21
10 -1.590IDP06174 gene: rbfA; ribosome-binding factor A [Helicobacter pylori J99] NP_223097 [Helicobacter pylori J99]  ali follow..  13  27..ELNSLSVTKVECSKG.... 41

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 5 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Clustering of highly homologous sequences to reduce the size of large protein databases. Bioinformatics. 2001 Mar;17(3):282-3.