current user: public

If you have questions about the server, please let us know.

Query: gi|16759001|ref|NP_454618.1| molybdenum cofactor biosynthesis protein MogA (STY0008) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .
# Score Template Links and tools%idFirst MNTLRIGLVSISDRASSGVYQDKGIPALEEWLASALTTPFELQTRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAIADREMPGFGEQMRQISLRFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKADDGSVSVPGIFASVPYCIQLLDGPYVETAPEVVAAFRPKSARRENMSSLast
1 -72.300IDP06143 gene: mogA; molybdenum cofactor biosynthesis protein MogA [Helicobacter pylori J99] NP_223453 [Helicobacter pylori J99]  ali follow..  50  1MQTIHIGVLSASDRASKGVYEDLSGKAIQEVLSEYLLNPLEFHYEIVADERDLIEKSLIKMCDEYQCDLVVTTGGTGPALRDITPEATKKVCQKMLPGFGELMRMTSLKYVPTAILSRQSAGIRNKSLIINLPGKPKSIRECLEAVF------------PAIPYCVDLILGNYMQVNEKNIQAFRPKQ........ 176
2 -19.600IDP00941 gene: moeA; molybdopterin biosynthesis protein MoeA STM0846 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  177VRKVRVALFSTGDELQLGQIYDTNRLTIHLMLQQLG--CEVINLGIIPDDPGKLRAAFIDADSQ--ADVVISSGGVSVGEADYTKTILEEL------GEIAFWKLAIKPGKPFAF------GKLSNSWFCGLPGNPVSAALTFYQLVQPLLAKLGGNTASAVPPRQRVRTASRLKKTPGRLDFQR........... 352
3 -9.170IDP01204 glycosyl transferase, group 2 family protein BA_2274 [Bacillus anthracis str. Ames]  ali follow..  16  4.............................EQVKNVGEEKKLCLCMIVKNESRIMERCLNATKSIVDFVSICDTGST-----DHTPEIIENWCKEEIPGTVHHEPFKNFGYNRSLAVSLAQKTYPEADYLLILDAD............................................................. 105
4 -8.570IDP00455 gene: tesA; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 YPO3080 [Yersinia pestis CO92]  ali follow..  14  28....TDTLLILGDSLSAGPIAQAWPSLLDKKWQATPSLPKVVNASISGDTAAQGLARLPALLKQHQPRWVLIELGANDALRGFPTQDIQ----RDLSEIINQITAAKAQPLLMQIRIPPNYGLAQQFDIPLLPFFMEQVAVKPEWMQDDGLHFIADWMAQQLKPLVVDPK.......................... 212
5 -6.410IDP06234 glycosyl transferase family protein [Streptococcus pneumoniae TIGR4] NP_344649 [Streptococcus pneumoniae TIGR4]  ali follow..  10  13.............................................VISNEEKYLPGLIEDLKNQEDIEILFINAMS----TDGTTAIIQQFIKED-TEFNSIRLYNNPKKNQASGFNLGVKHSVGD-LILKIDAHSKVTETFVMNNV................................................. 114
6 -6.380IDP01310 outer membrane protein OmpH VC2251 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  80....DGQLMGQDEVEKLRIEIGQLDSKYKIKAQALEQASARREAEEKQKLFKVIQDAVKKVAEKEGYDIVLDTSSMQYGKPNLSEKVIKAI......................................................................................................... 168
7 -6.350IDP02240 gene: ompH; outer membrane protein OmpH [Francisella tularensis subsp. tularensis SCHU S4] FTT1572c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  11  74....NSATMTKSELDKKQQQIQQEQQNFAEKARILQQKEYTAKDKLSKKFQASFDKAVQTIAKQKNYNVVLTTQALAYVNNDISSQVVELM......................................................................................................... 162
8 -6.180IDP91047 gene: vanRD; response regulator [Enterococcus faecium] EFA0003 [Enterococcus faecium]  ali follow..  13  6.............................................LVVDDEKELADLVEVYLKNDGYTVYKFYNGKDALKCIESVELDLAILDIMLPGFQICQKIREKFYFPVIMLTAKIMGLSVADDYITKPFNPLEVVARVKAQL................................................. 116
9 -6.140IDP92648 RecName: Full=Pentafunctional AROM polypeptide; Includes: RecName: Full=3-dehydroquinate synthase; Short=DHQS; Includes: RecName: Full=3-phosphoshikimate 1-carboxyvinyltransferase; AltName: Full=5-enolpyruvylshikimate-3-phosphate synthase; Short=EPSP synthase; Short=EPSPS; Includes: RecName: Full=Shikimate kinase; Short=SK; Includes: RecName: Full=3-dehydroquinate dehydratase; Short=3-dehydroquinase; Includes: RecName: Full=Shikimate dehydrogenase AFUB_013230 [Aspergillus fumigatus A1163]  ali follow..  23  39.......YVLITDTNIGSIYTPGFQKSFEEAAASVSPSPRLLIYNAPPGEVSKSRQTKADIEDWGRDTVVIALGGGVIG--DLT-------------GFVAAMRGVRFVQVPTTLLAMVDSSIGGKTAI-NLIGAPSRIYIDLEFLETLPVREFINGMAEVIKTAA.............................. 200
10 -6.030IDP04194 gene: yyaC; putative sporulation protein YyaC [Clostridium perfringens ATCC 13124] CPF_2444 [Clostridium perfringens ATCC 13124]  ali follow..  12  28....KTIIVCIGTDKCIG---DCLGPLVGTLLREKFFPLKVFGTLDSPIHALNLDKKITEILKTYPGYKILAI--------DACLGDSNSI----------EIHARYEPIHPGKGVGKSLRSVGDMSIIAIVDSSENIDLFTSRPIRLSFILDMSKVIVDSLIHSYYLKNKKN....................... 176

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 5 8 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Clustering of highly homologous sequences to reduce the size of large protein databases. Bioinformatics. 2001 Mar;17(3):282-3.