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Query: gi|16759003|ref|NP_454620.1| hypothetical protein (STY0010) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNVTYLHDEDLDFLQHCSEEQLADFARLLTHNEKGKARLSSVLSHNELFKAMEGHPEQHRRNWQLIAGEFQHYGGDSIANKLRGHGKQYRAILLDVAKRLKLKADKSMSTFEIEQQLLEHFLRHTWQKMDAAHKQEFLQAVDAKVSELEELLPLLMKDRSLAKGVSHLLSTQLTRILRTHAAMSILGHGLLRGAGLGGPVGAALNGVKAMSGSAYRVTIPAVLQIACLRRMMAAVQALast
1 -5.950IDP04265 putative cell division protein DivIVA [Clostridium perfringens ATCC 13124] CPF_2105 [Clostridium perfringens ATCC 13124]  ali follow..  15  20....YCPEEVDEFLDQIVEE----YEILFKENTALKEKLENSNDKIEHYSKIENTIQNTLLLAQNTAEQAKANAQKEADVIIKSANDTAQRILDKAHNDVIQINDEYDRVKQEFTKFFRSFMNFQIDTFDDLEKDF..................................................................................................... 150
2 -5.710IDP04537 gene: virF; VirF, member of the AraC family of transcriptional activators, required for transcription of virB and icsA [Shigella flexneri] CAC05780 [Shigella flexneri]  ali follow..  11  150...........SISIASSLSFSDQIRKIVEKNIEKRWRLSD------------------------ISNNLN-LSEIAVRKRLESEKLTFQQILLDMHHAAKLLLNSQSYINDVSRLIFIRKFNEYY-GITPKKFYLYHKKF................................................................................................ 262
3 -5.410IDP91862 DNA-binding protein [Streptococcus equi subsp. zooepidemicus] SZO_00390 [Streptococcus equi subsp. zooepidemicus]  ali follow..  12  7.................................................EKVRDLRYQKKITREDLCGDESELSIRQLARIELGQSIPSLSKVVFIAKALDVSVGFLTDGEDLELP-LKYLILRTPTYMDDDKLKLREEQFN............................................................................................... 103
4 -5.390IDP00851 gene: icaR; intercellular adhesion regulator SACOL2688 [Staphylococcus aureus subsp. aureus COL]  ali follow..  14  1.................................................................MKDKI-----DNAITLFSEKG--YDGTLDDIAKSVNIKKASLYYHFDSKKSIYEQSVKCCFDYLNNIIMMNQNKS................................................................................................. 70
5 -5.360IDP00163 gene: tcpN/toxT; TCP pilus virulence regulatory protein VC0838 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  161...........SIFITDDLDAMEKISCLVKSDITRNWRWAD------------------------ICGELR-TNRMILKKELESRGVKFRELINSISYSISLMKTGEFKIKQIAYQSFSTVFKSTMNVAPSEYLFMLTGVAE............................................................................................... 275
6 -5.290IDP90124 unknown [Monkeypox virus] MPXV_ZAI1979_005_036 [Monkeypox virus]  ali follow..  12  38.NMVYRFDKSTNILDYLSTERDHVMMAVQYY-----------MSKQRLDDLYRQLPTKTRSYVDIINTYCDKVNNNIMCDMASTESFTVYDINNEVNTILMNNKGLGVRLATI--SFITELGRRCMNPVETIKMFTLLSHT................................................................................................ 170
7 -5.250IDP91861 transcriptional regulator [Streptococcus dysgalactiae subsp. equisimilis GGS_124] SDEG_0056 [Streptococcus dysgalactiae subsp. equisimilis GGS_124]  ali follow..  7.................................................EKVRGLRLEKGISREELCGDEAELSVRQLARIELGQSIPSLAKVIFIAKALEVSVGYLTDGANLELP-YKELKYLILRTPTYMDDRKLQVRES............................................................................................... 100
8 -5.220IDP91866 hypothetical protein SPy_0037 [Streptococcus pyogenes M1 GAS] SPy_0037 [Streptococcus pyogenes M1 GAS]  ali follow..  15  7.................................................GKVKVLRLEKRISREDLCGDESELSVRQLARIELGQSIPSLSKVIFIAKALNVSVGYLTDGADLELP-LKYLILRTPTYMDDGKLQVREEQFD............................................................................................... 103
9 -5.160IDP91756 VF01_VACCP [Vaccinia virus L-IPV]  ali follow..  12  44.NMVYRFDKSTNILDYLSTERDHVMMAVRYY-----------MSKQRLDDLYRQLPTKTRSYIDIINIYCDKVSNNIMYDMASTKSFTVYDINNEVNTILMDNKGLGVRLATI--SFITELGRRCMNPVKTIKMFTLLSHT................................................................................................ 176
10 -5.130IDP91833 DNA-binding protein [Streptococcus suis SC84] SSUSC84_0046 [Streptococcus suis SC84]  ali follow..  1..........................................MNDKEFGQRVRQLRESASMTREQFCDDELELSVRQLTRIEAGASKPTFSKIQYIATRLGMGLYELMPDYVSLPERYSKLKFDVLRTPTYGNEDLAEKRDAM.............................................................................................. 101

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.