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Query: gi|16759004|ref|NP_454621.1|(removed signalp:1-23) hypothetical protein (STY0011) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110
# Score Template Links and tools%idFirst NDHKILGVIAMPRNETNDLALKIPVCRIVKRIQLTADHGDIELSGASVYFKTARSASQSLNVPSSIKEGQTTGWININSDNDNKRCVSKITFSGHTVNSSDMARLKVIGDDLast
1 -6.550IDP91909 cell wall surface anchor family protein, partial [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100002785 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  13  28.............................HVIPYELFAGDGMLTRLLLKASDKNGEAKNPALENVKTKGQYFYQVALDGNVAGKEKQALIDQFRANGTQTYSATVNVYGNK 118
2 -5.860IDP00770 superantigen-like protein SACOL0473 [Staphylococcus aureus subsp. aureus COL]  ali follow..  7  150.............FSINELFFIQKEEVSLKELDFKIRKLLIEKYRLRIVINMKDEKKHEIDLSEKLSFERMFDVMD-------SKQIKNIEVNLN................ 232
3 -5.670IDP91753 TSST_STAAU [Staphylococcus aureus]  ali follow..  6  151.............SPLKYGPKFDKKQLAISTLDFEIRHQLTQIHGLYWKITMNDGSTYQSDLSKKFEYNTEKPPIN-------IDEIKTIEAEIN................ 234
4 -5.650IDP00769 superantigen-like protein SACOL0472 [Staphylococcus aureus subsp. aureus COL]  ali follow..  10  229...............DVSEFKITKEQISLKELDFKLRKQLIEKNNLKIVIKMKNGGKYTFELHKKLQENRMADVIN-------SEQIKNIEVNLK................ 308
5 -5.640IDP91143 superantigen-like protein [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00393 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  6  151..............SIDEFFFIQKEEVSLKELDFKIRKLLIKKYKLRIVINMKDENKYEIDLSDKLDFERMADVIN-------SEQIKNIEVNLK................ 232
6 -5.570IDP91125 superantigen-like protein [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00391 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  6  147..............SKDSKFKITKEEISLKELDFKLRKKLMEEEKLKIVVKMEDDKFYTFELTKKLQPHRMGDTID-------GTKIKEINVELEYK.............. 231
7 -5.300IDP91101 superantigen-like protein [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00389 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  8  229...............DVSEFKITKEQISLKELDFKLRKQLIEKNNLKIVIKMKNGGKYTFELHKKLQENRMADVID-------GTNIDNIEVNIK................ 308
8 -5.100IDP04720 hypothetical protein [Yersinia pestis CO92] YPO1174 [Yersinia pestis CO92]  ali follow..  13  11..............................NIHSAGFNNSNSIQKYTGAVSSISDDLRINNEKCKSDIGTISGDIKINRHSAVYGNVNSVSGDITVKNSIVDKDITTVSGD 91
9 -4.980IDP95150 hypothetical protein KP1_2431 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002919177 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]  ali follow..  10  11....QTGDSLIFKVPEPEAFPVAEAEAVIQPIALSIHSWVVQTPYDLIVIDTATGNGRERGGNPLYHQLNTPYLENLRAAGVNPEDVTLVLLTH................. 111
10 -4.810IDP90084 hypothetical protein CGSHiII_00674 [Haemophilus influenzae PittII] ZP_01795673 [Haemophilus influenzae PittII]  ali follow..  7  27......DTLEQQFQQGSEATTRGDYQTTFKFLLPLAEQGNALAQMLGVMYAKGQGVKQDDVYRKAAEQGYADAQAMLLGQSGVQVNKSLAKEWFGKACDNGDQNGC..... 137
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Rychlewski L, Zhang B, Godzik A. Fold predictions for bacterial genomes. J Struct Biol. 2001 May-Jun;134(2-3):219-31. Review.