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Query: gi|16759009|ref|NP_454626.1| hypothetical protein (STY0016) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNPIIDGIIALEGGYVFNPKDKGGATHWGITEATARAHGYAGDMRDLTHAEAYAILEEDYWIKPGFDVISTLSWPVSFELCDAAVNIGDYHPSAWLQRWLNVFNHEGKRYPDVHVDGNIGPRTLAALEHYLAWRGQEGEAVLVKALNCSQGMYYLNVAEKNHNNEQFIYGWIKNRVTLast
1 -10.100IDP05636 putative peptidoglycan-binding/hydrolysing protein [Clostridium difficile 630] CD2388 [Peptoclostridium difficile 630]  ali follow..  13  136................................................................SGKEVKAAQIMLTLLGYNVGIDSKTYNAVVSFQKKYG-----------LSADGIIGPATWDKLGRLTDPTLS......................................... 200
2 -7.120IDP01823 gene: pst; pesticin [Yersinia pestis CO92] YPPCP1.05c [Yersinia pestis CO92]  ali follow..  14  203............GGVDLGQRSKQDLLNDGVPQYIADRLDGYYMLRGLSDNEAHLLSEGLFNDANIGLRFSDLPLRTRTALVSIGYQKGFKLSRTA-PTVWNKVIAK---------DWNGLVNAFNNIVDGMSDRRKREGALVQKDIDSGLLK......................... 357
3 -6.150IDP95273 hypothetical protein A1S_2896 [Acinetobacter baumannii ATCC 17978] YP_001085904 [Acinetobacter baumannii ATCC 17978]  ali follow..  8  43.DYVRAYALHNFGGYLD------------------------TDVELK--ENLDIFLQHEAFTGF------EGKGSPFTAVW------GSIPNHSLTKRILEYYHERIYTAEESTNTFSVSEILREKFFIDPLNNNLQVGKDSINTIHVYPSTHFCLDLPKNFATHHFYGSWLPD... 178
4 -6.150IDP05102 putative transglycosylase [Clostridium difficile 630] CD1130 [Peptoclostridium difficile 630]  ali follow..  13  32...IVYSVIKAESKFNSSAVSKKEAK--GLMQILDITRDWGAEELNLKNVDITNIRLGCWYLSKLYKEFGKLDLVIA------AYNGGSGNVKKWLEN-------NEYSKDGENLHDIPFKQTSKYVEKVKN............................................. 149
5 -5.920IDP01214 gene: cfa; cyclopropane-fatty-acyl-phospholipid synthase BA_3460 [Bacillus anthracis str. Ames]  ali follow..  10  176............GELITAAAKQYGVKAMGVTLSEEQYAKASERIKQEGLTDLVEVSLLDY-------------RDIKNQKFDKIVSVGMIEHVDNITQYFETVNT-------LNDGGISLLHCITSIEKYIFPGGYVPAVNELITNMTNEQFFIVDVESLRRHYGKTLQHWARNFEN 333
6 -5.880IDP05651 gene: cfa; guanylate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1183c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  13  173............GWLSIMAAQKYGVKVVGITISEEQCKKAKERVKELGLEDKIEIRLQNYQDLEFENYFDKV---VSVGMFE---HVGKENLGLYFMKVKQV----------LKPGGSMLLHSILAIDKYIFPGGYLPSLREVVSAMSEWDFHLLLAESLRMHYAKTLDLWDENFNK 330
7 -5.740IDP92752 hypothetical protein [Vibrio cholerae O1 biovar El Tor] AGG09408 [Vibrio cholerae O1 biovar El Tor]  ali follow..  11  1......................................................MYQVEFKTKEGARYTVVFTQYVCAMPNPDTLHVTSDRFDFKITRIKNDRSITQDVNFNLKIDGKVIPATQYVVSGQNSKRTSKQTDVILSNY............................... 92
8 -5.550IDP02784 putative transglycosylase [Salmonella typhimurium LT2] PSLT072 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  12  35..DLLRAISWKESRNRANAINPVTGYGSGLMQVDSQHFNELARYEQLVSDPCLNIYTGAYYLAIAFRKWGVSWTAVG------AYNAGFKKTPLQDARRLDYATDVHRIWIAIK............................................................... 146
9 -5.530IDP00589 gene: mltC; membrane-bound lytic murein transglycosylase C YPO0954 [Yersinia pestis CO92]  ali follow..  10  206.ESLILAIMQTESSFNPYAVSRSDA--LGLMQFKLKGKSGQPSRSYLFDPENNIDAGTAYLSILQNTYLGGIQNATSRRYA-TSYNGGAGSVLRVFHS-----------------------DKNKAVGIINTMSPGDVFQTLTTKHPSGESRRYVKVNSAQKNYRRY.......... 358
10 -5.520IDP01394 soluble lytic murein transglycosylase VC0700 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  15  505.......LARQESALNPDAQSPVGAR--GLMQIMPDTARYTARKYQLSYSNPDELYQVGKNIEIGSRYLSSLLERYNRILAFAAYNAGPSRVDSWLKR------SQGKLDAYGFIEAIPFAETRGYVQNILMF----------ETYYRDLMGVQGRFLNEHELNTKY.......... 648
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rodrigues AP, Grant BJ, Godzik A, Friedberg I. The 2006 automated function prediction meeting. BMC Bioinformatics. 2007 May 22;8 Suppl 4:S1-4.