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Query: gi|16759012|ref|NP_454629.1| hypothetical protein (STY0019) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIQAPVYRGFSPPGTEEEQTMTISIHASAFDVNSWYQKITLTFINESGNPVDMNHAAISFTASGHIDPWGNSGGTLKGNPPLTLNDSSYGTLETNNIIINNSDALLLQPGERGTLSFSLAATQVPVKMSAVTLTLASSSSEDAESATPSDQETPAIPAADEQPAESDVPEKDNDLQERGLTLNVSELNAASWYQHVTFTLTNLYAQAVDLNQLQLNFTASAHPDPYSPFQGTMLGNQAVTLASDGGWPIEKNTITINHDGALMLAAGDIAELQCYLAATQTPVAISDLNATLAHDPAHQGKICVHFPAMTQTVALKPVIELLFPAGETRRFVGEWGEVLTISDLSAGTYRLIVPVLANDEMQIAPVESSFTVTLQSGDAAAQVLast
1 -6.200IDP05515 putative lipoprotein [Clostridium difficile 630] CD1687 [Peptoclostridium difficile 630]  ali follow..  14..............................................................................................................................ILTIFIFMLTACEKDEQPDS-----------VDIQTEDKNEIKIDEGNAKVLNIGKSEIINIDEGDKVDTSTKVENNSTFNISNVELIYNE-----------------------YDENKKIISSDSKALL----DMTLMPGKVAYIECGHKTFVKGVEVYAYEYEAEGKIVKENTINIRNNNIKLENSSQYEVLSTSELKKVNESNEGITYQVKVKN-DLGNIILKTAEVNENGEYLTVNRVPSYKILKPSEET... 236
2 -6.050IDP04348 two component regulator [Clostridium perfringens ATCC 13124] CPF_2547 [Clostridium perfringens ATCC 13124]  ali follow..  325......EVIEIKAVIDGGSDILYRIDGEISEDTGYTRNSTLKWNAKKE----GNYRITLWAK----DESFIGDYEIESKLDYKIEKKVKKPIKITELIFDRDKRVSAEGGTDLKYSFLIWVEFIPNEKGNYQLDVVKDKYSTKEYDVHTVLNFKVREYAEGKIDHILVPAKEYFLVGDDIDIEVIVQNTRQVKVKYVTKVNGQVVEETDYVK-----------------------NKRFKVTPKCPGKYTIDIFARNIKCKEGFDSRREVRFY-----VSEALPITGTKISTSDKVFKINEEINFSTKCEGGSRVCYEYYIMVNGNWSLVQKYSRKSYYSFRPYVPGKYKVLVLTKSYYKKCAYEDYDTFEFKVE........ 686
3 -5.780IDP05417 conserved domain protein [Bacillus anthracis str. Ames] BA_4788 [Bacillus anthracis str. Ames]  ali follow..  17  26................................................................................................................................................................................................................................................................................................................................................DAKAATKLADGKYNIAFTVWKGDKDESSRMNRPATLTVKNGKQYVSF 76
4 -5.720IDP05615 putative lipoprotein [Bacillus anthracis str. Ames] BA_5522 [Bacillus anthracis str. Ames]  ali follow..  39.............................................................................................................................................................................................................................................................................................TPLKIDEVKINTVNGK-TLMVDVKAKGEKLTYAYYIYKGEEIVEKIWYKPENSLKYEVKEPGKYKVKAYAKDANKKIDSVYTNEVTIE.......... 125
5 -5.230IDP05488 putative LPXTG-motif cell wall anchor domain protein [Bacillus anthracis str. Ames] BA_4789 [Bacillus anthracis str. Ames]  ali follow..  16  24...............................................................................................................................................................................................................................................................................................................................................PYGNASAKLADGTYDINYVIQKAENDSASMAEKPAKLIVKNGEMRVQV 75
6 -4.880IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]  ali follow..  1673.EALPESETTAVVTVTPGEEDETSPLVPVPSSIA-SSEAPEPPASTRVTPAPEPKAKPGLSMGAALLAVRARSRLQRKHLAQQLSSSSSSEVSASSASSLSPSSSSSSDFAETRAKADALRARLQAAQARLAAARETEVSSSETESSETSEASFLSSDGEWDALWQSQRAAAMERQQR-LQKMVSGVKAAYRRLEEENTRLAATRRRDDKLQRQVEAERERAVELLKEATRRAKEEKDLIARQPPP-ARDWSDTVVLSTPQIFVNSQAACA---PFADSGRDEGGRDEWYEVSDACSRRAESSNESRTTAGAKLRQQQLDL---AGRT....................................................... 1990
7 -4.840IDP90298 bradyzoite-specific surface protein, putative [Toxoplasma gondii ME49] TGME49_120190 [Toxoplasma gondii ME49]  ali follow..  212........LTVNVKARASSVADENVVTCSYGAESNSEALKVDMTTTRNT--------VTIDCGSEGTLNPAADSAQY-----QNKDLDDCKKKFVDILPNFVISWWKTPTPGNASILTIPAADFPESEQQFRLGCVPNKAPQSDSQDTRVDNQSQVQSRTSAPTTCSVLVTVKAASSASYASPSLQTLI.................................................................................................................................................................................................. 382
8 -4.780IDP00026 tellurium resistance protein, putative BA_0399 [Bacillus anthracis str. Ames]  ali follow..  3IILEKGQKIDLTKGQPKVAKLQVGL--------GWDPIGQLSSLFGSKPNVDCDASVVMLEGDRFLNKND------------------FGNKLSTCGSIIHSGDNLTGEGAGDDETIFVELHKVPSRINRLVFVVNIYDCVNRRQDFGMIRNAYIRIQNPQTGEELARYNLSDNYAGKTTLIAGEMYRHGSEWKFSAV......................................................................................................................................................................................... 181
9 -4.580IDP05082 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2179 [Listeria monocytogenes EGD-e]  ali follow..  11.................................................................................................................LICTLLIVSLLPFSVWADSQERDGTDVEEITTKEKVTQETTSNETTSEPLKGTTVNKAINAKSFPSGDFSINSQKDVESGQTVNYNIYKITGPNTRYQNAKLVINLPKNGEFNQSLNELKIAGATPSYNKTTR----QLVYTYQT-----LNSGVVDKVILGYTPNGTKLVVTGELSADNLSEKVTEQAETTVNATATTALSNDFTKVENSIGDIGIWSFN-GKKIVIEYLADKLDYLGVAGDTPEPTKVEGQKLTWEIAAPT....... 297
10 -4.570IDP05698 hypothetical protein lmo2186 [Listeria monocytogenes EGD-e] lmo2186 [Listeria monocytogenes EGD-e]  ali follow..  23  27.....................................................................................................................................................................................................................................................................................................................................................AALKDGTYSVDYTVIQGDSDSAS--DKPATVTVNGGKSTVSL 72

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.