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current user: public |
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Query: gi|16759009|ref|NP_454626.1| hypothetical protein (STY0016) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . | |||||||
# | Score | Template | Links and tools | %id | First | MNPIIDGIIALEGGYVFNPKDKGGATHWGITEATARAHGYAGDMRDLTHAEAYAILEEDYWIKPGFDVISTLSWPVSFELCDAAVNIGDYHPSAWLQRWLNVFNHEGKRYPDVHVDGNIGPRTLAALEHYLAWRGQEGEAVLVKALNCSQGMYYLNVAEKNHNNEQFIYGWIKNRVT | Last |
1 | -5.750 | HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523; | ali follow.. | 17 | 12 | ............................................................................PLMFFDRAVNAQRSQLLTVMADAVSECRTAADQAAELNETGQVGLLRLAEVWSAIRAKEGMGGLILAKILSDVVAQFYAYLAELHYMMSSLMLGWFE.... | 127 |
2 | -3.240 | PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863; | ali follow.. | 10 | 1 | ...............................................................................MYTIQANPSGTRSMEISEENLVTIEKYSLFQHLIDSNGIVDEAVLEKLK................................................. | 49 |
3 | -3.110 | PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92] | ali follow.. | 10 | 1 | ...........................................................FYEAHFKRYIKEHVKGKKTGLFTLGADPAGEHGESMLKVGRELLNEGGEILAEFICQGAIDPKVIEEMKEMAAKMGDKAIHLITPERQAT-----WKQASTHPDENDLKNA....... | 114 |
4 | -3.110 | PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996; | ali follow.. | 12 | 2 | .........................................ANLDVLFERLSRSSFRRRFR----------LGVQEQQYLANKGMETILEHGKDFIAQRLAP--------AEIPNDGKQTPCKGHPVFLAQHATGTCCRGCI-KSLSQEEQAYILDVIAH----------WLDLQKE | 117 |
5 | -2.770 | PB048420 Q64S71_BACFR/1-165 PB048420; Pfam-B_48420; | ali follow.. | 10 | 7 | .......IVRSEN--AEYLCHNVNGTYVDVSDPSTEFVSGEDDFRLVDPDSSLTRKEYEFFYGNGWLALTLQSVEDETEYIVLSVNLESMDALDLPDRTFIDVNHYPDAMEFLETNNLATYSGYKRRSGFVEYPMAVLNLPLLYQHAPQIFQEANI..................... | 163 |
6 | -2.720 | PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033; | ali follow.. | 10 | 7 | FECKIRYEKVMENGMQKKVTEP-TEAEARIIEEMTPFISGEFTVSDIKRANYSELFPSDEESADRWFKCK-----LIFITLDEKSGAEKKTSTQVLVQAADLRDAVKKLDEGMK--GTMADYQIGMVSET............................................... | 136 |
7 | -2.630 | HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508; | ali follow.. | 9 | 118 | .......................QIAKYNTFLENITDCPMEESKKEQWSAEVKCLRAYFFLNLAFY--YTDVPMPLKTLSVDEANSISQTPQTEVYSQVEKDLKTAIDLLPV-HYLRGIWRLPGGG................................................... | 217 |
8 | -2.600 | PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete) | ali follow.. | 11 | 1 | ..........................................ENTQIKLSETVMVIDVAYLNFVINDLRKDLALFTMYLAMDAGLKGSDNDVQVLLVYDKQSGKLEHCLPSDLKNEASLGEFSFMAAPSEGFVSRGDLYLDLLQIVLNAAEVKKLIVVPFNEEYGKEVENVLRECAL | 155 |
9 | -2.470 | PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697; | ali follow.. | 9 | 39 | .........................................ETMPLLTGEQHSLLAYQIFRDEVMFGGFCQLGYIFDNPFAKVMRLWGAEDFSKLVYKAKKIYDAHRHDLEKERTEDEFMYEQYEAFDDLEEEDIEEEVTALVASYVDDHLELFAKIV................... | 165 |
10 | -2.390 | PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete) | ali follow.. | 16 | 68 | ............................................SAWLHHKGRNKHHLEYWIDYAVSKGMKMPIRVCEMFIDRSASKNYQKEKYTDKSALEYYEKSVDHY-------MIHPDTKAMLEYLLVMLSVKGEEYTYSYIKKE............................ | 178 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |