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Query: gi|16759006|ref|NP_454623.1| chaperone protein DnaJ (STY0013) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVMLKVPSETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLSEKQKQLLKDLQESFGGPTGEKNSPRSKSFFDGVKKFFDDLTRLast
1 -6.820sp|Q5T197|DCST1_HUMAN DC-STAMP domain-containing protein 1 OS=Homo sapiens GN=DCST1 PE=2 SV=1  ali   20  15..............................................................................................................RAAILRRERQQKAPRHPLADILHRGCPLLRRWLCRRCVVC---QAPETPESYVCRTCEAV---------------CWSC----DDMRQRCPVC................................................................................................................................................................................ 89
2 -6.790sp|Q6ZRI0|OTOG_HUMAN Otogelin OS=Homo sapiens GN=OTOG PE=2 SV=3  ali   12  287.....................................................................................................................YQINTTSVLCDIHCEANQEYEHPRDLAACCGSCRNVSCPGASWIADCAHCS---STPLGAVLVRSPISCPECAKVGGSVVPSLEGC................................................................................................................................................................................ 389
3 -6.420sp|Q9UBC1|IKBL1_HUMAN NF-kappa-B inhibitor-like protein 1 OS=Homo sapiens GN=NFKBIL1 PE=1 SV=1  ali   14  23......ALVARGPPLEEQGALRRYLRVQQVRWHPDRTWELGRVMGAVTALSQALNRHAEALK............................................................................................................................................................................................................................................................................................................................. 88
4 -6.170sp|Q9UG01|IF172_HUMAN Intraflagellar transport protein 172 homolog OS=Homo sapiens GN=IFT172 PE=1 SV=2  ali   15  1.....HYYATRSAAQSVKQLETVAARSVSLLRHTQLLPVDK-AAKAVGWDNMAFIFLNDAIEEGTLDGLDHSDFQDT-----------------DIPFEVLPAKQHVPEAEREEVRDWVLTVSMDQRLEQVLPRDERGA-YEASLVAASTGVTGYPILRNKIEFKRPGKAANKDNWNKFLMAIKTSPVCQDVLKFISQWCGG................................................................................................................................................................................. 202
5 -5.740sp|Q5TYM5|FA72A_HUMAN Protein FAM72A OS=Homo sapiens GN=FAM72A PE=2 SV=1  ali   18  17.................................................................................................................................................CCKFCKQVLSSRGMKPTNAVDFTGRCYFTKICKCKLKDIACLKCGNIGYHVIVPCSSC................................................................................................................................................................................ 92
6 -5.720sp|Q6L9T8|FA72D_HUMAN Protein FAM72D OS=Homo sapiens GN=FAM72D PE=2 SV=1  ali   15  17.................................................................................................................................................CCKFCKQVLSSRGMKPTNAVDFTGRCYFTKICKCKLKDIACLKCGNIGYHVIVPCSSCLLS---CNNRHFWMFHSQAVYDINRLDSTGV................................................................................................................................................. 120
7 -5.660tr|C9J3Y5|C9J3Y5_HUMAN Uncharacterized protein OS=Homo sapiens GN=FAM72D PE=4 SV=1  ali   14  18.................................................................................................................................................KGRGGWVPAALRSVSQDRVPGCTGRCYFTKICKCKLKDIACLKCGNIGYHVIVPCSSCLLS---CNNRHFWMFHSQAVYDINRLDSTGV................................................................................................................................................. 120
8 -5.630sp|Q9BRN9|TM2D3_HUMAN TM2 domain-containing protein 3 OS=Homo sapiens GN=TM2D3 PE=1 SV=2  ali   14  26................................................................................................................................FSCTYGKPVTFAVKPSVTCVDQDFKSQKNFIINMTCRFC----QLPETDYECTNSTSCMTVSCPRQRYPANCTVCLGNRTFP--KMLYCNWTGG............................................................................................................................................................. 121
9 -5.600sp|Q86X60|FA72B_HUMAN Protein FAM72B OS=Homo sapiens GN=FAM72B PE=2 SV=2  ali   18  17.................................................................................................................................................CCKFCKQVLSSRGMKPTNAVDFTGRCYFTKICKCKLKDIACLKCGNIGYHVIVPCSSC................................................................................................................................................................................ 92
10 -5.230tr|Q5TYM6|Q5TYM6_HUMAN Family with sequence similarity 72, member A OS=Homo sapiens GN=FAM72A PE=4 SV=1  ali   17  18.................................................................................................................................................KGRGGWVPAALRSVSQDGVPGCTGRCYFTKICKCKLKDIACLKCGNIGYHVIVPCSSC................................................................................................................................................................................ 92

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 2 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.