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Query: gi|16759011|ref|NP_454628.1| putative chitinase (STY0018) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MATSKLIQGDTITETTHAANGFDPATSDDKISYTSARVAKPVYNKYKNSTTKPKVFGYYTDWSQYDSRLQGNMSQPGRGCDLTNVSPTAYDKLIFGFVGITGFRKIDKEDRDVVAEAAALCGKVKYEPTFLDPWGDFQSYINLGFETSGWDVDPKTVTQANAKGMLGALRDMQAKAKAAGHTLALSMSIGGWSMSNGFHETAASDSSRKTFAKGVVKLFKQFPMFSEVDIDWEYPNDEGAGNPFGAEDGANYALLIAELRKQLDSAGLSNVKISIAASAVTTIFDHAKVKDLLAAGLYGINLMTYDFFGTPWAETLGHHTNRKALEEGGWAVETIVDHLLAEGFSADRINIGYAGYTRNARQVEIESLSPLKGSYNPGSGDTTGSFESGTSEWYDVIYSYLDLENQKGRNGFNVYTDQVADADYLYSPESKLFLSLDTPRTVKAKGEYAAKLGLGGVFTWTIDQDNGVLVNAVREGLGYEIESEVIDMEPFYFEGINVEKDDEQSDSDDAQKVNHAPKAAIELMVVGGSTVQLSGAGSSDEDNDELSFSWGVPSQIDVADKTAEIIEVVVPEVSEKTAFQFTLFVRDCYNEPSSQQRFVLTAVPALSQVQPEPEEEEEIIVPVPDEEEETTPAEDDTSADDKTSPYAQWDASTVYGANWGSFEIVSWKGHNYQVKWWSMGNQPDLNCGVGGAWTDLGAYLast
1 -5.480sp|Q6UXT9|ABH15_HUMAN Abhydrolase domain-containing protein 15 OS=Homo sapiens GN=ABHD15 PE=2 SV=2  ali   11  5...............................................................................................................................................................................................WFSGPHLQTLCHFVLPVAPGPELAREYLQL----DDVALDWVVGPCVRGRRITSAGGLPAVLLVIPNAWGRLTRNVLGLCLL.......................................................................................................................................................................................................................................................................................................................................................................................................................................... 85
2 -4.170sp|Q7Z2Y8|GVIN1_HUMAN Interferon-induced very large GTPase 1 OS=Homo sapiens GN=GVINP1 PE=2 SV=2  ali   10  8......................................................................................................................................................................................IVSFVRVGSASKSQIMNCLLSKRKHDVFFHRHCTGSRKDCLLMGGVEICWFCPGG-------EDEDRFDNCVTFTNLHGDAKEHEQQLSFLKEVSTVIVVLMSASDDNEGNRKIVRNLWICLLDDKEATMTNISGQRMRMGIKNRNEAELTEELTTTIRHLLELSDTALSLE-----------------------------------------------DCSQIAHQQGFLI--EDQRDCKEAKEKAQALMAFLGKMKLSQIKEKLLPLQG-----LWH.............................................................................................................................................................................................................................................. 237
3 -4.020sp|Q70CQ2|UBP34_HUMAN Ubiquitin carboxyl-terminal hydrolase 34 OS=Homo sapiens GN=USP34 PE=1 SV=2  ali   9  8LLCVAKIFQIQFPLYTAYKHNTHPTIEDISTQESNILGAFCDMNDVEVPLHLLRYVCLFCGKNGLSLMKDCFEYGTPETLPFLIAHIPFRTYVIRYLCKLSDQELRQSAARNMADLMWSTVKEPLDTTLCFDKES---------------DLAFKYFMSPTLTMRLAGLSQITNQLHTFNDVCNIAKELADWLISNNVVEHIFGPNLHIEIIKVILNFLAAEGRLSTQHIDWA--------AAQLKHCSRYIHDLFPSLIKNLDPVPLRHLL---------NLVSALEPSVHTEQTLYLASML............................................................................................................................................................................................................................................................................................................................................................................................................ 317
4 -4.010sp|Q5BKU6|YP026_HUMAN Putative uncharacterized protein LOC641298 OS=Homo sapiens PE=5 SV=2  ali   15  8......................................................................................................................................................................................CECYISTADWAAVQEWHDLKKSTSSTSLNLKADFNYIKSLSSFESGKLEL--PGENINLLAGGSKEKIDMKKLLRNM........................................................................................................................................................................................................................................................................................................................................................................................................................................................ 94
5 -3.940sp|Q9BX69|CARD6_HUMAN Caspase recruitment domain-containing protein 6 OS=Homo sapiens GN=CARD6 PE=1 SV=2  ali   18  9....................................................................................................................................................................................................SFVRLGYCSFSKSRILNTLLS--KLHKIFDGVEITWCFPD----SDDRKENPFFQKPVALANLRGNLESFWTQFGFLMEVSSAVFFFTDCLGEKE........................................................................................................................................................................................................................................................................................................................................................................................................................ 117
6 -3.930sp|Q15413|RYR3_HUMAN Ryanodine receptor 3 OS=Homo sapiens GN=RYR3 PE=1 SV=3  ali   9  6......................................................................................................................................................................................LKKMLPIG--PGDQELISLAKSRYSHRDTDEEVREHLRN-EKSDDPAVKWQLNLYKDVLKSEEPFNPEKTVERVQRISAAV.................................................................................................................................................................................................................................................................................................................................................................................................................................................... 93
7 -3.910sp|Q7Z4H7|HAUS6_HUMAN HAUS augmin-like complex subunit 6 OS=Homo sapiens GN=HAUS6 PE=1 SV=2  ali   14  5...............................................................................................................................................................................................WA---SVNETLMFLEKEREVVSSVLSLVNQY-ALDGTNVAINIPR-----------------LLLDKIEKQMFQLHIGNVY-------EAGKLNLLTVIQLLNEVLKVMKYERCQADQARLTVDLHYLEKETKFQKERLSDLKHMRYRIKDDLTTIRHSVV........................................................................................................................................................................................................................................................................................................................................................... 137
8 -3.860tr|E7EPC2|E7EPC2_HUMAN Uncharacterized protein OS=Homo sapiens GN=LIX1L PE=4 SV=1  ali   14  6........................................................................................................................................................................LESNKGKSMLEFQELMTVFQLLHWNGS--LKAMRERQCSRQEVLAHYSHRALDDDIRHQMALDWSVPGALSRELASTERELDEARLAGKELRFHKEKKD----ILVLAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................... 114
9 -3.740sp|Q8IVB5|LIX1L_HUMAN LIX1-like protein OS=Homo sapiens GN=LIX1L PE=2 SV=1  ali   14  9........................................................................................................................................................................LESNKGKSMLEFQELMTVFQLLHWNGS--LKAMRERQCSRQEVLAHYSHRALDDDIRHQMALDWSVPGALSRELASTERELDEARLAGKELRFHKEKKD----ILVLAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................... 117
10 -3.700sp|C9J069|CI172_HUMAN Uncharacterized protein C9orf172 OS=Homo sapiens GN=C9orf172 PE=3 SV=1  ali   12  1.....................................................................................................................................................................................DMETLILTPPPGTAGLDQDGEAGRRAREVAFIHIQRELRL-----GVFLRHEFPRVYEQLCEF-VEANRRFTPTTIYPT---DRRTGRPFMCMIMAASEPRALDWVASANLLDDIM.................................................................................................................................................................................................................................................................................................................................................................................................................. 108
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 9 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;