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Query: gi|16759013|ref|NP_454630.1| hypothetical protein (STY0020) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIDAPALGNAKLTVEIADATQADERTVTLIANQPQLITRLLAGHHYTVNLQPAMINNRFISAPIQLTGFIPAAAQVAEVAVAYQQSALDTASFVTVDATILGLPDGVAPQRYLFSSGKYQYSLMLESGSDRQTLSLRFAPGLYDVQTDDIFIDSVPWRCEQAGPLRLLQKVNHVALEFLPGVTLQVKGWPDYLAHGGVTVNAPETVSLYRDIPFSALFKYDGFDGGGDPVPAAEVDVNGDVFLDYATLPIHKTVALVRQIEKEAGRSVMPVMVIYTANASGGSALVDLQDAQKLRNHFGNFITQCLAAQSYKDETHPVPATFVLNPDFLGALQQGPYGYTVVRQKNSVPVNAQLAAAIQALPAMAGFIAPSLPTFSDDLYGYIQAVNYLVRQFAPDVAFGWQTNVWATGTADWVLRDTADPVAEGQAIAGFIHELGVYSGEYAPDFIAFDEFERDCFSPDALAHYGWNATCWLNYLAMVKQVTKALLTPAMLWQIPGGHMPTVEEGVSKISAAHFASGGTFFMGDARIGSDPDTLSLQLLNTALNSATYGVPTVGDFLRKDKGYDWGQMQALNLPDFNVFSILWGGGSTISITTIHSNGEDGGWLADKMVEYYAAPRYFRLast
1 -7.420sp|Q9BU19|ZN692_HUMAN Zinc finger protein 692 OS=Homo sapiens GN=ZNF692 PE=1 SV=1  ali   11  1............................................................................................................................................................................................................................................................................................................................................................................................................IRLGGHMEQW----------------------CLLKERLGFSLHSQLAKFLLDRYTSSGCVLCAGPEPL--PPKGLQYLVLLSHAHSRECSLPGLVWECSAGH......................................................................................................................... 90
2 -6.190sp|Q5VT40|FA78B_HUMAN Protein FAM78B OS=Homo sapiens GN=FAM78B PE=2 SV=1  ali   10  20...........................................................................................................................................................................................................................................................................................................................................VYDVCATIDQCPTRIEETSPIVLRYKTPYFKASARVVMPPIPRHETWVVGWIQACNQFFNTYSDLGMSSWELPDLREGRVKAISDSDGVSYPWYGNTTETVTLVGPTNKISRFSVSMNDSVTWAVPVSDSNVPLLTRIKRDQSFTTWLVAMNTTTKEKIILWRMLLGQ......................................................................................................................... 207
3 -6.090sp|Q5JUQ0|FA78A_HUMAN Protein FAM78A OS=Homo sapiens GN=FAM78A PE=2 SV=1  ali   11  17............................................................................................................................................................................................................................................................................................................LLYAMGCIQSIGGKARVFREGITV--------IDVKASIDPVPTSIDESSSVVLRYRTPHFRASAQVVMPPIPKKETWVVGWIQACSHFYNQYGEQGMSSWELPDLQEGKIQAISDSDGVNYPWYGNTTETCTIVGPTKRDSKFIISMNDNFTWAVPVSESNVAKLTNIYRDQSFTTWLVATNTSTNDMIILWRMPLG.......................................................................................................................... 226
4 -5.160sp|Q8N9S7|CX059_HUMAN Uncharacterized protein CXorf59 OS=Homo sapiens GN=CXorf59 PE=2 SV=1  ali   8  16......................................................................................................................................................................................................................................................................................................................................KVVNAAQTWFSLFGWPEGPHSFSIPETIRRDVYKMQFYSSTSPPQKFSRQNDFSKYNKTIYDVLLHLSGKMPPGINSSQSLPVDNH--EKRVIQLHLQHSSLLDFLNAQGGCISHVLPEFLL-NTMPVSSCTPKKKCSIVIEMSKFEAW-AWTDVFLQIYKV-LVLSRVVPYCSNNM-ICVQNTPKVNPCFASSNIYSD............................................................................................... 228
5 -4.890sp|Q15042|RB3GP_HUMAN Rab3 GTPase-activating protein catalytic subunit OS=Homo sapiens GN=RAB3GAP1 PE=1 SV=3  ali   17  1..................................................................................................................................................................................................................................................................................................................................................................................................................................................MAADSEPESEVFEITD---------------FTTASEWERFISKVEEV-------LNDWKLIGNSLGKPLEKGIFTSGTWEEKSDEISFAD............................................................................................... 69
6 -4.860sp|P21817|RYR1_HUMAN Ryanodine receptor 1 OS=Homo sapiens GN=RYR1 PE=1 SV=3  ali   11  10...........................................................................................................................................................................................................................................................................................................................................................LPIGLNMCAPTDQDLITLAKTRYALKDTDEEVREFLHNNLHLQGKVEGSPSLRWQMALYRVPGREEDADDPEKIVRRVQEVSAVLYYLDQTEHPY.................................................................................................................................................................................. 105
7 -4.780sp|Q8N0X2|SPG16_HUMAN Sperm-associated antigen 16 protein OS=Homo sapiens GN=SPAG16 PE=2 SV=2  ali   12  25...............................................................................................................................................................................................................................................................................................INDLKGLKLHYASYEPTIRVLHEKHHTLLKEKMLTSLERD..................................................................................................................................................................................................................................................................................................... 64
8 -4.710sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2  ali   10  2............................................................................................................................................................................................................................................................................................................................................................................................................................................................................DDNGYHWDTSDW----------MPSVPLPDI--EFPNYEVIDEQTPLYSADPNAIDT....................................................................................................... 47
9 -4.530sp|Q92570|NR4A3_HUMAN Nuclear receptor subfamily 4 group A member 3 OS=Homo sapiens GN=NR4A3 PE=2 SV=3  ali   16  1........................................................................................................................................................................................................................................................................................................................................................................................................................................................EYTTEIMNPDKLTMDLGSTEITATATTSLPSISTFVE--GYSSNYELKPSCVYQMQ............................................................................................................................ 56
10 -4.460sp|Q96FB5|RRNAD_HUMAN Protein RRNAD1 OS=Homo sapiens GN=RRNAD1 PE=2 SV=2  ali   9  9...............................................................................................................................................................................................................................................................................................................................................................................................................................LSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDT--------------PCSWQEALDGLK............................................................................................................................................ 60
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 8 6 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Awobuluyi M, Yang J, Ye Y, Chatterton JE, Godzik A, Lipton SA, Zhang D. Subunit-specific roles of glycine-binding domains in activation of NR1/NR3N-methyl-D-aspartate receptors. Mol Pharmacol. 2007 Jan;71(1):112-22. Epub 2006 Oct 17.