FFAS03 results for 16759002

Query: gi|16759002|ref|NP_454619.1| hypothetical protein (STY0009) [Salmonella enterica subsp. enterica serovar Typhi str. CT18], from S.typhi

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 .`
#	Score	Template	Links and tools	%id	First	`MGNTKLANPAPLGLMGFGMTTILLNLHNAGFFALDGIILAMGIFYGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKMGLTDAPDAQLLGAYLGLWGVFTLFMFFGTLKAARALQFVFLSLTVLFALLAVGNITGNEATIHIAGWVGLVCGASAIYLAMGEVLNEQFGRTILPIGEAH`	Last
1	-91.400	`[S] COG1584 Predicted membrane protein`	`ali follow..`	65	17	`..KDLSANPAPLGLMGFGMTTVLLNIHNAGFYPLGAVILSMGIFYGGLGQVIAGIEEWKKGNTFGATAFTSYGLFWLTLVVIVLLPKFGDNFALTPTDFAAYLFLWGLFTLYMFIGTLKATRALQVVFLSLTILFFLLAAGNYMGNPAIIKIAGYEGIFVGFSAIYAAMGQVLNEAYGKKIVPL....`	201
2	-8.400	`[O] KOG2292 Oligosaccharyltransferase, STT3 subunit`	`ali follow..`	12	80	`..........PLGLMITSGGIHWLLHVLNIPVHIRDICVFLAPIFSGLTSIST----YLLTKELWSAGAGLFAASFIAIVPGYI--SRSVAGSYDNEGIAIFAL---QFTYFLWVRSVKTGSVFWSAAAALSYFYMVSA--------------GGYVFIINLIPLHVFVLLIMGRYSPRLLTSY....`	241
3	-8.290	`[S] KOG2889 Predicted PRP38-like splicing factor`	`ali follow..`	9	1	`MANRTEKAAKTVG--QFLVEKIIRQRIYDSMYWKEHCFALTAELVVDKGMDLRYIGGIYAGNIKPTPFLCALKMLQIQPDKDIVLEFIQQEEFKYIRALGAMYLRLT.................................................................................`	110
4	-8.140	`[A] KOG2412 Nuclear-export-signal (NES)-containing protein/polyadenylated-RNA export factor`	`ali follow..`	7	313	`LINDTKGDSLAYHWILNFIAKAVVHQAETEVRVKPESALPLGKLTLYLLVQFPELQELFMARLVKKCPFVIMGGILSLFAIITRLQLPQEFITTTSHPFPI---SWHILARICNTPLNLITNTHFVILGSWW-----------AAAVQFLQAYGASKLLILIGEELARLRILLEAWQNNNMESFPEMS`	537
5	-8.120	`[T] KOG2290 Rhomboid family proteins`	`ali follow..`	19	656	`.....................................LWLSLFLHAGILHCLVSICEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPA------GSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFIGLFLSFA.........................`	785
6	-7.880	`[R] COG1287 Uncharacterized membrane protein, required for N-linked glycosylation`	`ali follow..`	10	85	`..........PLGLMVTSGIIFKVLHLLRINVNIRDVCVLLAPAFSGITAIAT----YYLARELKSDACGLLAAAFMGIAPGYT--SRSVAGSYDNEAIAITLL---MSTFALWIKAVKSGSSFWGACTGLLYFYMVTA--------------GGYVFITNMIPLHVFVLLLMGRYTSKLYI......`	244
7	-7.700	`[A] KOG4746 Small nuclear RNA activating complex (SNAPc), subunit SNAP43`	`ali follow..`	13	4	`...................................GGASCLTPVYAGIRDDLNSFLRYLQFESVR---FFDYKVMFENRG---------------------------MVGLFTGRHNSAEIIEFNECLLVHCLPYMEECVCPGTPRSLKERLFGLYSL-------YTFYYIQQEKHVVKVRMDPDSSR`	120
8	-7.570	`[C] KOG2189 Vacuolar H+-ATPase V0 sector, subunit a`	`ali follow..`	15	408	`IATYREINPAPYGAIMLLAALFFILKEKQLEAARIKDEIFQTFFGGRYVIFLMGAFSIYTGNDVFSKSINTFGSSWYYLDDEKRSESQLILPPETAFDGNPYPIVWNLAE-LSFLNSMKMKMSVLFGIAQMTFGVLLSYQNFIYFKSDLDIKYMFIPQMIFLSSIFIYLCIQI...............`	617
9	-7.030	`[S] KOG4556 Predicted membrane protein`	`ali follow..`	9	7	`.............LSLLLATWTLLSIARLVFDLIGNLWVVVVFDFVQIVLLISGLFGATQKRRPLLYTLLSSNALSVTINVLIFIGVFGEISRPYLSAGLPYSSSFFLRFTPYCDAEFDVIRKKWVQKQCLI------------PFYSVEASQAILHIIFAIVTSIFSILVIVELRKKPIRSN.....`	167
10	-6.880	`[S] COG5291 Predicted membrane protein`	`ali follow..`	12	16	`.....MLRVPPITRYMTLLISAVALLVYVDAVSPYSLYFTSFLYFGTLDMFMHVVFLYRYSRMLEEGCVNTSEYFWLILVISSVLFAISNI-------YGISALGTSFSATITYIWTKRNPRAIVQIFGFISFPFILPGFMLLSRRSIS--IDDVLGIVVGHLFHYF-----------KDVYPRWGRD`	199

FFAS is supported by the NIH grant R01-GM087218-01

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