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Query: d1x9fc_ a.1.1.2 (C:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) {Common earthworm (Lumbricus terrestris) [TaxId: 6398]}, from SCOP207

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst HEHCCSEEDHRIVQKQWDILWRDTESSKIKIGFGRLLLTKLAKDIPEVNDLFKRVDIEHAEGPKFSAHALRILNGLDLAINLLDDPPALDAALDHLAHQHEVREGVQKAHFKKFGEILATGLPQVLDDYDALAWKSCLKGILTKISSRLLast
1 -45.700[C] COG1017 Hemoglobin-like flavoprotein  ali follow..  13  2....LDAQTIATVKATIPLLVETGP------KLTAHFYDRMFTHNPELKEIFNM------SNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTS-FQIKPEQYNIVGTHLLATLDEMFNQEVLDAWGKAYGVLANVFIHR. 134
2 -24.600[C] KOG3378 Globins and related hemoproteins  ali follow..  12  259....ITERQKHIFTETFPVIFKEYK------RNGLVLFAKYFSEFPHYKNIWPQFRSALLASNELANHCSVYMSGLKV....................................................................... 330
3 -6.930[R] COG2346 Truncated hemoglobins  ali follow..  12.....AGSKEATMSSETVTLYEAIGGDATVRALTRRFYELM-DTLPEAARCRAI------HPADLSGSEAKFYDYLTGYLGGPPVYVE-----PMLRRRHFV-APIGPAERDEWLLCFRRAMDETENAKLREIIWAPVERLAFHMQN.. 145
4 -6.380[T] KOG3725 SH3 domain protein SH3GLB  ali follow..  24.EETFLKAERTELDSHFENLLQRADKTEDHTRRLLSAIEGYLQPNPTMEEVFYEKLELKKDGAIRQNNLEQLSTAMTEAGEQFGETTPYGSALLKVAQTENRLGQAERELCGQAATNTLLPIRRFLEGDMKTI................ 157
5 -6.240[S] COG3945 Uncharacterized conserved protein  ali follow..  12  11.......EEHTVILKALEILNVIDINENNMQDIKIIIFVDNCHHVKEEKVLFDFLEHKGMVGGPIYNKLRDIINRIEARYNEFEELREDLNSLIVLLASHIDKENLSDDENKVIYEKF-ERIEEEFGKERHERYIELIDTLYGRYIN.. 170
6 -6.170[S] COG1507 Uncharacterized conserved protein  ali follow..  12  1...MVDRADLEAVARHLGREPRGVLEIAYRCPSG----------EPGVVKTAPKLDDGTPFPTLY------THPVLIAAASRLESTGLMREMTERLGQDPELAAGYRRAHYLTERDAIESLGTTFSAGGMPDRVKCLHVLIAHSLAKG. 133
7 -5.890[A] COG5107 Pre-mRNA 3`-end processing (cleavage and polyadenylation) factor  ali follow..  10  32.RERIKDNPTNI--LSYFQLIQYLETQESYAKV-REVYEQFHNTFPFYSPAWTLQLKGELARDEFE-TVEKILAQCLSGKLENNDLSLWSTYLDYIRRKNNLITG-GQEARAVIVKAFQLVMQKC--PKSSSFWNEYLNFLEQ...... 170
8 -5.820[S] KOG4654 Uncharacterized conserved protein  ali follow..  8.....GSGSTKRPKEKVVYIYELLCRGEDPSSESPEFWNEFFLLQPNFEALENEIGK--LNNEQLQLVKPNLNTLFQRCIEMLDTLHTLCSLFYGIFKKSNAEPTLN-EKMDEWLKLLMQYCNRILLGDVPENARFMCLKLLQVLVTGT 165
9 -5.800[R] COG3481 Predicted HD-superfamily hydrolase  ali follow..  15  160...........LAYHVVSMLNLAKAIADLYPSLDRDLLYAILHDLGKVKELSGPVSTSYTVEGNLLGHISIMVTELSKAAEELQIDSEEVLILQHLILSHHGKAEWGSPKPPMVKEAEILHYIDNLDAKMNM................. 282
10 -5.640[P] COG3793 Tellurite resistance protein  ali follow..  60.DGECEASEKAKIEQVLRNQPALSAFTSEINAISATIIGQLDTNFKIGRRAALREIEDVKHDTREAEDVLDVAVAIAEADGEIEPEER--KVLEEIAG----VLGLRLENH...................................... 163

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 8 0 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.