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Query: d2gkma_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbN [TaxId: 1773]}, from SCOP207

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GLLSRLRKREPISIYDKIGGHEAIEVVVEDFFVRVLADDQLSAFFSGTNMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHLADALTAAGVPSETITEILGVIAPLAVDVTSLast
1 -58.200[R] COG2346 Truncated hemoglobins  ali follow..  15  13GSKEATMSSETVTLYEAIGGDATVRALTRRFYELMDTLPEAARCRAPADLSGSEAKFYDYLTGYLGGPPVYVEKMLRRRHFVAPIGPAERDEWLLCFRRAMDETIENAKLREIIWAPVERLAFHMQN 145
2 -11.300[C] COG1017 Hemoglobin-like flavoprotein  ali follow..  15  1.MLDAQTIATVKATIPLL--VETGPKLTAHFYDRMFTNPELKEIFNNQRNGDQREALFNAIAAYASNIENLPAEKIAQKHTSFQIKPEQYNIVGTHLLATLDEFNPGQEVLDAWGKAYGVLANVFIH 133
3 -6.800[S] COG4728 Uncharacterized protein conserved in bacteria  ali follow..  16  57GVARHSETEEALVIYQALYGEFGLVRPLEMFTEAVEVDGEWVPRFVLVSPEADPLGLQK.................................................................... 116
4 -5.380[S] COG5452 Uncharacterized conserved protein  ali follow..  11  2.............IFGLFKKKSGNIAIVKRQYAALTAAARQPFLYTDLDVPDTVMGRFEMLSAIL----LYFRRTRSSARAGQEIAQEIVDAFFEDVDHSIRELGVGDASVPKKMKKLAG....... 105
5 -5.240[S] COG1630 Uncharacterized protein conserved in archaea  ali follow..  15  357...........................VNIGYVRFERGDVIYMVQSTKKIEDILPLILHH------RVGGYI---LQLAHDGAKISYKEARMALDALINYLRNKD...................... 427
6 -5.080[S] COG3662 Uncharacterized protein conserved in bacteria  ali follow..  12  1.MTVASRTSAPDSLTWKYFGDLRTIGAIQNMYPELGAGVEEHSILLREPLQRVARSVYPIMGVVYDGDRA-TGQQIKGYHRTIGLTEAEKHQLFEEHVRWYRMYGMSMRPVPKSWEDFQDYWDRVCR 175
7 -4.940[V] COG2602 Beta-lactamase class D  ali follow..  13  117..LGSAMRESAIWYYQALAGEERMKTWLHTLYGNEDISGGIDQFWLQSSLTISPLEQETFLEKLAKEELPFDKPVMKIVKRMMIQEEGD...................................... 207
8 -4.910[K] COG2944 Predicted transcriptional regulator  ali follow..  13  82.....................................................................ELTPSEIKALRENNHVSQPVFARYLNTSESTVQKAKRPSGPALKLLSIVRKHGLEMLS 143
9 -4.840[J] KOG2726 Mitochondrial polypeptide chain release factor  ali follow..  15  254GIKSATLEIEGRYAYGYISGEKGTHRIVQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNV-VETAVRITHIPTGVQLANKTRALIRLKAKLMVIAEEQRATEI.............. 387
10 -4.820[S] KOG4147 Uncharacterized conserved protein  ali follow..  14  13.IRSFEHRNFKPVVYHGVNLDQTVKEFIVFLKQDIPLRTNLPPPFRNYKYDALKIIHQAH----------------KSKTNELVLSLEDDERLLLKEDSTLKAAGIASETEIAFFCE.......... 112
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Awobuluyi M, Yang J, Ye Y, Chatterton JE, Godzik A, Lipton SA, Zhang D. Subunit-specific roles of glycine-binding domains in activation of NR1/NR3N-methyl-D-aspartate receptors. Mol Pharmacol. 2007 Jan;71(1):112-22. Epub 2006 Oct 17.