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current user: public |
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Query: d2itka2 d.26.1.1 (A:51-163) Mitotic rotamase PIN1, domain 2 {Human (Homo sapiens) [TaxId: 9606]}, from SCOP207 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 | |||||||
# | Score | Template | Links and tools | %id | First | EPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE | Last |
1 | -75.700 | [O] KOG3259 Peptidyl-prolyl cis-trans isomerase | ali follow.. | 100 | 51 | EPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE | 163 |
2 | -32.100 | [O] COG0760 Parvulin-like peptidyl-prolyl isomerase | ali follow.. | 19 | 267 | QPERRNYSVIQF---------------------KTEVEAKAALDELKKG-ADFAVIAKEKSTDISRNNGGELGWLEPETTPDEVK-AANLSEKGQLSDVIKSSVGYLIVRLND | 357 |
3 | -5.860 | [S] COG2164 Uncharacterized conserved protein | ali follow.. | 13 | 3 | ..ERGVEMRLRIRFESAECEVELYEEWAPETVRAIADALPIKSTANRWGDEIYFTTQVAEENSKDVVELGDVAYWIPGKAICLFRPASAVNVIGRIVNSMEG........... | 116 |
4 | -5.510 | [E] COG0549 Carbamate kinase | ali follow.. | 14 | 219 | ..EMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEE---------------------------GHFAKGSMLPKVEAAASFARSRKAKEGIEGKTGTVICQ... | 310 |
5 | -5.130 | [S] COG5451 Predicted secreted protein | ali follow.. | 12 | 98 | ..EILGAVQYLRTLCPSSGPEDWRKSMSALLAADTASEPERRQRMTAAFNRGYRSFAAIHTSCTRAAIMAEENYRNEGA---------------TLAQEIASRFG........ | 185 |
6 | -5.110 | [S] COG4925 Uncharacterized conserved protein | ali follow.. | 10 | 183 | QEEGETKMRISIQANGETTIYELNDGKAAKELYEQLPLTIDVED---SNNEKIFYPPKKLDTTNTPMQFGTLAYYAPWEDVVMFYDRF--YELGTVISGGEH........... | 289 |
7 | -5.030 | [A] COG5182 Splicing factor 3b, subunit 2 | ali follow.. | 13 | 252 | .PSYIRATGI-----VQMRNAVHENEADMPLRQKMRERVQPKMGKLDIDYQKLHDAFFRYQTKPVLTGFGECYFEGK-----ELEADVKEKRPGDISEELREALGI....... | 346 |
8 | -4.910 | [J] COG0013 Alanyl-tRNA synthetase | ali follow.. | 14 | 568 | ......ATHLLALQAGSLNEVEFLRFDFTHFAQVTKEELAEIERQVNEVIWQSLKVETVETDIATAKEMGAMALFG-----EKYGKNVRVVKIGDYS--IELCGGTHTQTTSE | 678 |
9 | -4.800 | [J] COG0359 Ribosomal protein L9 | ali follow.. | 11 | 50 | ......ARNYLIPKGLGVVATPGILRQVEQRRLKELERLKAEKDAAEARKVALETIGRFVIKKQVGEAEAIFGTVTTQEVADAVEAATQSLDRRGISLPDIHKTGFYQAQI.. | 155 |
10 | -4.780 | [O] KOG0549 FKBP-type peptidyl-prolyl cis-trans isomerase | ali follow.. | 12 | 1 | ....MKTAVIVGLLCLLAIAYAADEQKIDKLQIGVKKRAENCVQKSRKGDQ--GTLLDGTEFDSSRTRNEEFTFLGQGNVIKGWDQGLLNMCVGERRILIPPHLGY....... | 108 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98. |